ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123070800	50S ribosomal subunit assembly factor BipA
tae-r.2	123062075	50S ribosomal subunit assembly factor BipA
tae-r.2	123079190	50S ribosomal subunit assembly factor BipA
hvu-r.1	123444426	50S ribosomal subunit assembly factor BipA
bdi-r.1	100840121	GTP-binding protein TypA/BipA homolog
osa-u.5	4327008	uncharacterized LOC4327008
zma-u.5	100382669	uncharacterized LOC100382669
sbi-r.1	8075587	GTP-binding protein TypA/BipA homolog
ath-u.5	EMB2785	elongation factor family protein
gma-u.5	100789218	50S ribosomal subunit assembly factor BipA
gma-u.5	100782425	50S ribosomal subunit assembly factor BipA
sly-u.5	101257189	uncharacterized LOC101257189
bra-r.6	103865101	GTP-binding protein TypA/BipA homolog
vvi-u.5	100247278	uncharacterized LOC100247278
ppo-u.5	18104559	uncharacterized LOC18104559
mtr-u.5	11419376	50S ribosomal subunit assembly factor BipA
ghi-r.1	107934354	50S ribosomal subunit assembly factor BipA
ghi-r.1	107959777	50S ribosomal subunit assembly factor BipA
bna-r.1	106406589	50S ribosomal subunit assembly factor BipA
bna-r.1	106437566	50S ribosomal subunit assembly factor BipA-like
bna-r.1	111215080	50S ribosomal subunit assembly factor BipA-like
sot-r.1	102591349	GTP-binding protein TypA/BipA homolog
cit-r.1	102618580	uncharacterized LOC102618580
nta-r.1	107788877	uncharacterized LOC107788877
nta-r.1	107784041	uncharacterized LOC107784041
cre-r.1	CHLRE_13g606000v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:1990904 [list] [network] ribonucleoprotein complex	(1478 genes)	IEA
GO:0005829 [list] [network] cytosol	(2324 genes)	IEA

GO MF

GO:0003924 [list] [network] GTPase activity	(553 genes)	IEA
GO:0005525 [list] [network] GTP binding	(638 genes)	IEA

Protein

XP_044350074.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 4

(predict for XP_044350074.1)

Subcellular
localization
TargetP

mito 6, chlo 6

(predict for XP_044350074.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123070800	tae-r.2 for 123062075	tae-r.2 for 123079190	hvu-r.1 for 123444426	bdi-r.1 for 100840121	osa-u.5 for 4327008	zma-u.5 for 100382669	sbi-r.1 for 8075587	ath-u.5 for EMB2785	gma-u.5 for 100789218	gma-u.5 for 100782425	sly-u.5 for 101257189	bra-r.6 for 103865101	vvi-u.5 for 100247278	ppo-u.5 for 18104559	mtr-u.5 for 11419376	ghi-r.1 for 107934354	ghi-r.1 for 107959777	bna-r.1 for 106406589	bna-r.1 for 106437566	bna-r.1 for 111215080	sot-r.1 for 102591349	cit-r.1 for 102618580	nta-r.1 for 107788877	nta-r.1 for 107784041	cre-r.1 for CHLRE_13g606000v5

Ortholog

Ortholog ID: 9409

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

EMB2785

Function^*

50S ribosomal subunit assembly factor BipA

GTP-binding protein TypA/BipA homolog

uncharacterized LOC4327008

uncharacterized LOC100382669

GTP-binding protein TypA/BipA homolog

elongation factor family protein

50S ribosomal subunit assembly factor BipA

uncharacterized LOC101257189

GTP-binding protein TypA/BipA homolog

uncharacterized LOC100247278

uncharacterized LOC18104559

50S ribosomal subunit assembly factor BipA

50S ribosomal subunit assembly factor BipA-like

GTP-binding protein TypA/BipA homolog

uncharacterized LOC102618580

uncharacterized LOC107788877

uncharacterized LOC107784041

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4
bdi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma03010	Ribosome	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi01240	Biosynthesis of cofactors	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	4
bna01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	5
sot03020	RNA polymerase	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	3
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta03010	Ribosome	3
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123070800

123062075

123079190

123444426

100840121

4327008

100382669

8075587

817658

100789218

100782425

101257189

103865101

100247278

18104559

11419376

107934354

107959777

106406589

106437566

111215080

102591349

102618580

107788877

107784041

5724634

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123070800 (tae-r.2 coexpression data)

Top 50 enrichment test to 123070800 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	1	1	1	2	1	1	1	1	1	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123070800 (tae-r.2 coexpression data)

Top 50 enrichment test to 123070800 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**