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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g102250v5   ribosomal protein S3 
 ath-u.5   AT2G31610   Ribosomal protein S3 family protein 
 ath-u.5   AT3G53870   Ribosomal protein S3 family protein 
 ath-u.5   AT5G35530   Ribosomal protein S3 family protein 
 gma-u.5   100799156   40S ribosomal protein S3-3 
 gma-u.5   100808705   40S ribosomal protein S3 
 gma-u.5   100800747   40S ribosomal protein S3-3 
 sly-u.5   101257282   small ribosomal subunit protein uS3y 
 sly-u.5   101244892   small ribosomal subunit protein uS3x-like 
 sly-u.5   101244604   small ribosomal subunit protein uS3x 
 osa-u.5   4343869   40S ribosomal protein S3-1 
 osa-u.5   4333308   small ribosomal subunit protein uS3y 
 zma-u.5   100282772   40S ribosomal protein S3-like 
 zma-u.5   100274348   40S ribosomal protein S3-1 
 zma-u.5   100194112   40S ribosomal protein S3-1 
 bra-r.6   103857385   40S ribosomal protein S3-2 
 bra-r.6   103857392   40S ribosomal protein S3-2 
 bra-r.6   103865126   40S ribosomal protein S3-2 
 vvi-u.5   100261737   small ribosomal subunit protein uS3x 
 vvi-u.5   100259512   small ribosomal subunit protein uS3x 
 ppo-u.5   7463768   40S ribosomal protein S3-3 
 ppo-u.5   7474877   40S ribosomal protein S3-3 
 ppo-u.5   7483474   40S ribosomal protein S3-3 
 mtr-u.5   11414550   40S ribosomal protein S3-3 
 mtr-u.5   25485537   40S ribosomal protein S3-3 
 mtr-u.5   11441628   40S ribosomal protein S3-1 
 tae-r.2   543076   40S ribosomal protein S3-3 
 tae-r.2   123044244   40S ribosomal protein S3-3 
 tae-r.2   123187980   40S ribosomal protein S3-3 
 hvu-r.1   123413461   40S ribosomal protein S3-3 
 hvu-r.1   123425352   40S ribosomal protein S3-3-like 
 ghi-r.1   107907043   40S ribosomal protein S3-3 
 ghi-r.1   107907112   40S ribosomal protein S3-2 
 ghi-r.1   107929954   40S ribosomal protein S3-3 
 bna-r.1   106453640   40S ribosomal protein S3-2-like 
 bna-r.1   111205477   40S ribosomal protein S3-2 
 bna-r.1   106451400   40S ribosomal protein S3-2-like 
 sbi-r.1   8069647   40S ribosomal protein S3-3 
 sbi-r.1   8079175   40S ribosomal protein S3-3 
 sot-r.1   102580086   40S ribosomal protein S3-3-like 
 sot-r.1   102599656   40S ribosomal protein S3-2-like 
 cit-r.1   102611929   40S ribosomal protein S3-3 
 cit-r.1   102623282   40S ribosomal protein S3-3 
 bdi-r.1   100829722   40S ribosomal protein S3-3 
 bdi-r.1   100845739   40S ribosomal protein S3-3 
 nta-r.1   107831973   small ribosomal subunit protein uS3x-like 
 nta-r.1   107795696   small ribosomal subunit protein uS3x 
 nta-r.1   107813032   small ribosomal subunit protein uS3x 

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Top 50 coexpressed genes to CHLRE_02g102250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g102250v5 (cre-r.1 coexpression data)

CoexMap"5725348"


creCHLRE_02g102250v5 | Entrez gene ID : 5725348      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 3 2 3 3 2 3 3 3 2 3 3 2 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (30 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001699797.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_001699797.2)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_001699797.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g102250v5
ath-u.5
for
AT2G31610
ath-u.5
for
AT3G53870
ath-u.5
for
AT5G35530
gma-u.5
for
100799156
gma-u.5
for
100808705
gma-u.5
for
100800747
sly-u.5
for
101257282
sly-u.5
for
101244892
sly-u.5
for
101244604
osa-u.5
for
4343869
osa-u.5
for
4333308
zma-u.5
for
100282772
zma-u.5
for
100274348
zma-u.5
for
100194112
bra-r.6
for
103857385
bra-r.6
for
103857392
bra-r.6
for
103865126
vvi-u.5
for
100261737
vvi-u.5
for
100259512
ppo-u.5
for
7463768
ppo-u.5
for
7474877
ppo-u.5
for
7483474
mtr-u.5
for
11414550
mtr-u.5
for
25485537
mtr-u.5
for
11441628
tae-r.2
for
543076
tae-r.2
for
123044244
tae-r.2
for
123187980
hvu-r.1
for
123413461
hvu-r.1
for
123425352
ghi-r.1
for
107907043
ghi-r.1
for
107907112
ghi-r.1
for
107929954
bna-r.1
for
106453640
bna-r.1
for
111205477
bna-r.1
for
106451400
sbi-r.1
for
8069647
sbi-r.1
for
8079175
sot-r.1
for
102580086
sot-r.1
for
102599656
cit-r.1
for
102611929
cit-r.1
for
102623282
bdi-r.1
for
100829722
bdi-r.1
for
100845739
nta-r.1
for
107831973
nta-r.1
for
107795696
nta-r.1
for
107813032


Ortholog ID: 1489
Species cre ath ath ath gma gma sly sly sly osa osa zma zma zma bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_02g102250v5 AT2G31610 AT3G53870 AT5G35530 LOC100808705 LOC100499737 LOC101257282 LOC101244892 LOC101244604 LOC4343869 LOC4333308 LOC100282772 LOC100274348 LOC100194112 LOC103865126 LOC103868229 LOC100261737 LOC100259512 LOC7463768 LOC7483474 LOC7491996 LOC11414550 LOC11441628 LOC11440250 LOC543076 LOC123187980 LOC123052121 LOC123413461 LOC123425352 LOC107907112 LOC107932229 LOC107958848 LOC106392854 LOC106437727 LOC106437728 LOC8069647 LOC8079175 LOC102580086 LOC102599656 LOC102580417 LOC102611929 LOC102623282 LOC100829722 LOC100845739 LOC107831973 LOC107813032 LOC107819043
Function* ribosomal protein S3 Ribosomal protein S3 family protein Ribosomal protein S3 family protein Ribosomal protein S3 family protein 40S ribosomal protein S3 40S ribosomal protein S3 small ribosomal subunit protein uS3y small ribosomal subunit protein uS3x-like small ribosomal subunit protein uS3x 40S ribosomal protein S3-1 small ribosomal subunit protein uS3y 40S ribosomal protein S3-like 40S ribosomal protein S3-1 40S ribosomal protein S3-1 40S ribosomal protein S3-2 40S ribosomal protein S3-2 small ribosomal subunit protein uS3x small ribosomal subunit protein uS3x 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-1 40S ribosomal protein S3-3 40S ribosomal protein S3-1 40S ribosomal protein S3-1 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3-like 40S ribosomal protein S3-2 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-2-like 40S ribosomal protein S3-2 40S ribosomal protein S3-2 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3-like 40S ribosomal protein S3-2-like 40S ribosomal protein S3-3-like 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 small ribosomal subunit protein uS3x-like small ribosomal subunit protein uS3x small ribosomal subunit protein uS3z
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725348 817719 824554 833518 100808705 100499737 101257282 101244892 101244604 4343869 4333308 100282772 100274348 100194112 103865126 103868229 100261737 100259512 7463768 7483474 7491996 11414550 11441628 11440250 543076 123187980 123052121 123413461 123425352 107907112 107932229 107958848 106392854 106437727 106437728 8069647 8079175 102580086 102599656 102580417 102611929 102623282 100829722 100845739 107831973 107813032 107819043
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