ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102580086	40S ribosomal protein S3-3-like
sly-u.5	101244604	small ribosomal subunit protein uS3x
sly-u.5	101244892	small ribosomal subunit protein uS3x-like
sly-u.5	101257282	small ribosomal subunit protein uS3y
ath-u.5	AT2G31610	Ribosomal protein S3 family protein
ath-u.5	AT3G53870	Ribosomal protein S3 family protein
ath-u.5	AT5G35530	Ribosomal protein S3 family protein
gma-u.5	100800747	40S ribosomal protein S3-3
gma-u.5	100808705	40S ribosomal protein S3
vvi-u.5	100261737	small ribosomal subunit protein uS3x
vvi-u.5	100259512	small ribosomal subunit protein uS3x
ppo-u.5	7483474	40S ribosomal protein S3-3
ppo-u.5	7463768	40S ribosomal protein S3-3
ppo-u.5	7474877	40S ribosomal protein S3-3
mtr-u.5	25485537	40S ribosomal protein S3-3
mtr-u.5	11440250	40S ribosomal protein S3-1
mtr-u.5	11441628	40S ribosomal protein S3-1
osa-u.5	4343869	40S ribosomal protein S3-1
osa-u.5	4333308	small ribosomal subunit protein uS3y
zma-u.5	100282772	40S ribosomal protein S3-like
zma-u.5	100194112	40S ribosomal protein S3-1
zma-u.5	100274348	40S ribosomal protein S3-1

Annotation

functional annotation

KEGG

sot03010 [list] [network] Ribosome (406 genes)

GO BP

GO:0006412 [list] [network] translation

(522 genes)

IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(47 genes)	IEA
GO:0005634 [list] [network] nucleus	(2556 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(377 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1335 genes)	IEA

Protein

XP_006351621.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, plas 2, nucl 1, cysk_nucl 1, golg_plas 1, E.R._plas 1, mito_plas 1

(predict for XP_006351621.1)

Subcellular
localization
TargetP

other 5, scret 3

(predict for XP_006351621.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102580086	sly-u.5 for 101244604	sly-u.5 for 101244892	sly-u.5 for 101257282	ath-u.5 for AT2G31610	ath-u.5 for AT3G53870	ath-u.5 for AT5G35530	gma-u.5 for 100800747	gma-u.5 for 100808705	vvi-u.5 for 100261737	vvi-u.5 for 100259512	ppo-u.5 for 7483474	ppo-u.5 for 7463768	ppo-u.5 for 7474877	mtr-u.5 for 25485537	mtr-u.5 for 11440250	mtr-u.5 for 11441628	osa-u.5 for 4343869	osa-u.5 for 4333308	zma-u.5 for 100282772	zma-u.5 for 100194112	zma-u.5 for 100274348

Ortholog

Ortholog ID: 1489

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

40S ribosomal protein S3-3-like

small ribosomal subunit protein uS3y

small ribosomal subunit protein uS3x

small ribosomal subunit protein uS3z

small ribosomal subunit protein uS3x-like

Ribosomal protein S3 family protein

40S ribosomal protein S3

40S ribosomal protein S3-2

small ribosomal subunit protein uS3x

40S ribosomal protein S3-3

40S ribosomal protein S3-1

40S ribosomal protein S3-2

40S ribosomal protein S3-3

40S ribosomal protein S3-2-like

40S ribosomal protein S3-2

40S ribosomal protein S3-3

40S ribosomal protein S3-1

small ribosomal subunit protein uS3y

40S ribosomal protein S3-1

40S ribosomal protein S3-like

40S ribosomal protein S3-3

40S ribosomal protein S3-3-like

40S ribosomal protein S3-3

ribosomal protein S3

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	15
sot03008	Ribosome biogenesis in eukaryotes	3
sot03013	Nucleocytoplasmic transport	3
sot03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	12
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	17
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21
osa04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	12
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5
tae03013	Nucleocytoplasmic transport	3
tae00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	17

Expression

Expression pattern

Entrez Gene ID^*

102580086

102580417

101257282

101244604

107819043

107831973

817719

824554

100808705

100499737

103865126

100261737

100259512

7483474

7463768

11414550

11440250

107907112

107958848

106392854

106437727

102623282

102611929

4343869

4333308

100194112

100282772

123187980

123052121

123425352

123413461

8069647

8079175

100829722

100845739

5725348

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102580086 (sot-r.1 coexpression data)

Top 50 enrichment test to 102580086 (sot-r.1 coexpression data)


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre
Paralog	1	3	3	2	2	3	3	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102580086 (sot-r.1 coexpression data)

Top 50 enrichment test to 102580086 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**