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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g666200v5   uncharacterized protein 
 cre-r.1   CHLRE_06g281100v5   uncharacterized protein 
 ath-u.5   AT5G18190   Protein kinase family protein 
 ath-u.5   AT2G25760   Protein kinase family protein 
 ath-u.5   AT3G03940   Protein kinase family protein 
 gma-u.5   100819969   casein kinase 1-like protein HD16 
 gma-u.5   100807373   casein kinase 1-like protein HD16 
 sly-u.5   101245026   casein kinase 1-like protein HD16 
 sly-u.5   101265359   casein kinase 1-like protein HD16 
 osa-u.5   4334396   casein kinase 1-like protein HD16 
 osa-u.5   4327338   casein kinase 1-like protein HD16 
 osa-u.5   4326170   casein kinase 1-like protein HD16 
 zma-u.5   100285738   uncharacterized LOC100285738 
 zma-u.5   100383451   Protein kinase family protein 
 zma-u.5   100286103   ATP binding protein 
 bra-r.6   103859531   casein kinase 1-like protein HD16 
 bra-r.6   103855200   casein kinase 1-like protein HD16 
 bra-r.6   103842169   casein kinase 1-like protein HD16 
 vvi-u.5   104877804   casein kinase 1-like protein HD16 
 vvi-u.5   100267624   uncharacterized LOC100267624 
 vvi-u.5   100263956   casein kinase 1-like protein HD16 
 ppo-u.5   7491038   casein kinase 1-like protein HD16 
 ppo-u.5   7478417   casein kinase 1-like protein HD16 
 ppo-u.5   7475098   casein kinase 1-like protein HD16 
 mtr-u.5   11432252   casein kinase 1-like protein HD16 
 mtr-u.5   11438607   casein kinase 1-like protein HD16 
 mtr-u.5   25490136   casein kinase 1-like protein HD16 
 tae-r.2   123101901   casein kinase 1-like protein HD16 
 tae-r.2   123105362   casein kinase 1-like protein HD16 
 tae-r.2   123180803   casein kinase 1-like protein HD16 
 hvu-r.1   123427343   casein kinase 1-like protein HD16 
 hvu-r.1   123443119   casein kinase 1-like protein HD16 
 hvu-r.1   123444386   casein kinase 1-like protein HD16 
 ghi-r.1   107920312   casein kinase 1-like protein HD16 
 ghi-r.1   107916400   casein kinase 1-like protein HD16 
 ghi-r.1   107913878   casein kinase 1-like protein HD16 
 bna-r.1   106391343   casein kinase 1-like protein HD16 
 bna-r.1   125575196   casein kinase 1-like protein HD16 
 bna-r.1   106452296   casein kinase 1-like protein HD16 
 sbi-r.1   8075560   casein kinase 1-like protein HD16 
 sbi-r.1   8055724   casein kinase 1-like protein HD16 
 sot-r.1   102599332   uncharacterized LOC102599332 
 sot-r.1   102603072   uncharacterized LOC102603072 
 sot-r.1   102583902   uncharacterized LOC102583902 
 cit-r.1   102618306   hypothetical protein 
 cit-r.1   102619111   hypothetical protein 
 cit-r.1   102627154   casein kinase 1-like protein HD16 
 bdi-r.1   100839189   casein kinase 1-like protein HD16 
 bdi-r.1   100821235   casein kinase 1-like protein HD16 
 bdi-r.1   100825718   casein kinase 1-like protein HD16 
 nta-r.1   107795530   casein kinase 1-like protein HD16 
 nta-r.1   107803461   casein kinase 1-like protein HD16 
 nta-r.1   107813347   casein kinase 1-like protein HD16 

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Top 50 coexpressed genes to CHLRE_16g666200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g666200v5 (cre-r.1 coexpression data)

CoexMap"5726979"


creCHLRE_16g666200v5 | Entrez gene ID : 5726979      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 3 2 2 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006897 [list] [network] endocytosis  (25 genes)  IEA  
GO:0018105 [list] [network] peptidyl-serine phosphorylation  (62 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (396 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (211 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001701465.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_001701465.1)
Subcellular
localization
TargetP
other 9  (predict for XP_001701465.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g666200v5
cre-r.1
for
CHLRE_06g281100v5
ath-u.5
for
AT5G18190
ath-u.5
for
AT2G25760
ath-u.5
for
AT3G03940
gma-u.5
for
100819969
gma-u.5
for
100807373
sly-u.5
for
101245026
sly-u.5
for
101265359
osa-u.5
for
4334396
osa-u.5
for
4327338
osa-u.5
for
4326170
zma-u.5
for
100285738
zma-u.5
for
100383451
zma-u.5
for
100286103
bra-r.6
for
103859531
bra-r.6
for
103855200
bra-r.6
for
103842169
vvi-u.5
for
104877804
vvi-u.5
for
100267624
vvi-u.5
for
100263956
ppo-u.5
for
7491038
ppo-u.5
for
7478417
ppo-u.5
for
7475098
mtr-u.5
for
11432252
mtr-u.5
for
11438607
mtr-u.5
for
25490136
tae-r.2
for
123101901
tae-r.2
for
123105362
tae-r.2
for
123180803
hvu-r.1
for
123427343
hvu-r.1
for
123443119
hvu-r.1
for
123444386
ghi-r.1
for
107920312
ghi-r.1
for
107916400
ghi-r.1
for
107913878
bna-r.1
for
106391343
bna-r.1
for
125575196
bna-r.1
for
106452296
sbi-r.1
for
8075560
sbi-r.1
for
8055724
sot-r.1
for
102599332
sot-r.1
for
102603072
sot-r.1
for
102583902
cit-r.1
for
102618306
cit-r.1
for
102619111
cit-r.1
for
102627154
bdi-r.1
for
100839189
bdi-r.1
for
100821235
bdi-r.1
for
100825718
nta-r.1
for
107795530
nta-r.1
for
107803461
nta-r.1
for
107813347


Ortholog ID: 309
Species cre cre ath ath gma gma sly sly osa osa osa zma zma zma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_16g666200v5 CHLRE_06g281100v5 AT3G03940 AT3G13670 LOC100819969 LOC100800869 LOC101245026 LOC101267788 LOC4334396 LOC4326170 LOC4324710 LOC100285738 LOC103648356 LOC103649605 LOC103859531 LOC103855200 LOC103828226 LOC100263956 LOC100254265 LOC100253221 LOC7478417 LOC7462292 LOC7455746 LOC11432252 LOC11438607 LOC11422003 LOC123180803 LOC123115563 LOC123069191 LOC123427343 LOC123444530 LOC123452693 LOC107897345 LOC107893255 LOC107962165 LOC125575196 BNAC01G40370D LOC106432518 LOC8075560 LOC110433807 LOC110432526 LOC102603072 LOC102583902 LOC102581327 LOC102627154 LOC102607770 LOC102609857 LOC100839189 LOC100825718 LOC100836999 LOC107785522 LOC107770915 LOC107763246
Function* uncharacterized protein uncharacterized protein Protein kinase family protein Protein kinase family protein casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 uncharacterized LOC100285738 casein kinase 1-like protein HD16 casein kinase I casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 uncharacterized LOC102603072 uncharacterized LOC102583902 casein kinase I isoform gamma-3-like casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 hypothetical protein casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16 casein kinase 1-like protein HD16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03040 Spliceosome 3
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr00500 Starch and sucrose metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae00561 Glycerolipid metabolism 2
tae00564 Glycerophospholipid metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae04146 Peroxisome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726979 5720923 819551 820572 100819969 100800869 101245026 101267788 4334396 4326170 4324710 100285738 103648356 103649605 103859531 103855200 103828226 100263956 100254265 100253221 7478417 7462292 7455746 11432252 11438607 11422003 123180803 123115563 123069191 123427343 123444530 123452693 107897345 107893255 107962165 125575196 106433055 106432518 8075560 110433807 110432526 102603072 102583902 102581327 102627154 102607770 102609857 100839189 100825718 100836999 107785522 107770915 107763246
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