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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g181200v5   3-methylcrotonyl-CoA carboxylase 
 ath-u.5   MCCB   3-methylcrotonyl-CoA carboxylase 
 gma-u.5   100791763   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 gma-u.5   100777651   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sly-u.5   101262668   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 osa-u.5   4345605   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 zma-u.5   100281617   uncharacterized LOC100281617 
 bra-r.6   103862316   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bra-r.6   103834444   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 vvi-u.5   100253805   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ppo-u.5   7457538   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 mtr-u.5   11446438   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 tae-r.2   123164970   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 tae-r.2   123148371   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 tae-r.2   123088070   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 hvu-r.1   123408126   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ghi-r.1   107938005   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ghi-r.1   107953393   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bna-r.1   106361054   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like 
 bna-r.1   106441143   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like 
 bna-r.1   106361079   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sbi-r.1   8075626   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sot-r.1   102589983   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 cit-r.1   102619146   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 bdi-r.1   100826561   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 nta-r.1   107776091   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 nta-r.1   107782183   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 

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Top 50 coexpressed genes to CHLRE_03g181200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g181200v5 (cre-r.1 coexpression data)

CoexMap"5728448"


creCHLRE_03g181200v5 | Entrez gene ID : 5728448      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 1 1 3 1 2 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00280 [list] [network] Valine, leucine and isoleucine degradation (17 genes)
GO BP
GO:0006552 [list] [network] L-leucine catabolic process  (3 genes)  IEA  
GO CC
GO:1905202 [list] [network] methylcrotonoyl-CoA carboxylase complex  (1 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity  (2 genes)  IEA  
Protein XP_001702941.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_001702941.2)
Subcellular
localization
TargetP
chlo 1  (predict for XP_001702941.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g181200v5
ath-u.5
for
MCCB
gma-u.5
for
100791763
gma-u.5
for
100777651
sly-u.5
for
101262668
osa-u.5
for
4345605
zma-u.5
for
100281617
bra-r.6
for
103862316
bra-r.6
for
103834444
vvi-u.5
for
100253805
ppo-u.5
for
7457538
mtr-u.5
for
11446438
tae-r.2
for
123164970
tae-r.2
for
123148371
tae-r.2
for
123088070
hvu-r.1
for
123408126
ghi-r.1
for
107938005
ghi-r.1
for
107953393
bna-r.1
for
106361054
bna-r.1
for
106441143
bna-r.1
for
106361079
sbi-r.1
for
8075626
sot-r.1
for
102589983
cit-r.1
for
102619146
bdi-r.1
for
100826561
nta-r.1
for
107776091
nta-r.1
for
107782183


Ortholog ID: 8575
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g181200v5 MCCB LOC100791763 LOC100777651 LOC101262668 LOC4345605 LOC100281617 LOC103862316 LOC103834444 LOC100253805 LOC7457538 LOC11446438 LOC123164970 LOC123148371 LOC123088070 LOC123408126 LOC107938005 LOC107953393 LOC106361054 LOC106441143 LOC106436706 LOC8075626 LOC102589983 LOC102619146 LOC100826561 LOC107776091 LOC107782183
Function* 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial uncharacterized LOC100281617 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
cre00350 Tyrosine metabolism 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre00360 Phenylalanine metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 9
ath00640 Propanoate metabolism 5
ath00410 beta-Alanine metabolism 3
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 3
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 2
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00052 Galactose metabolism 3
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 9
osa00640 Propanoate metabolism 5
osa01200 Carbon metabolism 3
osa00410 beta-Alanine metabolism 3
osa00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 10
zma01210 2-Oxocarboxylic acid metabolism 5
zma00640 Propanoate metabolism 3
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 7
bra01200 Carbon metabolism 5
bra00640 Propanoate metabolism 4
bra00410 beta-Alanine metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 6
bra01200 Carbon metabolism 5
bra01210 2-Oxocarboxylic acid metabolism 4
bra00640 Propanoate metabolism 3
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 4
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo01200 Carbon metabolism 3
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr00350 Tyrosine metabolism 4
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
mtr00360 Phenylalanine metabolism 3
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 15
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 11
hvu00640 Propanoate metabolism 5
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00071 Fatty acid degradation 3
hvu00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 10
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 10
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 8
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 7
sot00310 Lysine degradation 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00500 Starch and sucrose metabolism 2
sot00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 3
cit03010 Ribosome 2
cit00650 Butanoate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 7
bdi00640 Propanoate metabolism 4
bdi01200 Carbon metabolism 4
bdi00330 Arginine and proline metabolism 3
bdi00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 6
nta00310 Lysine degradation 4
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728448 829549 100791763 100777651 101262668 4345605 100281617 103862316 103834444 100253805 7457538 11446438 123164970 123148371 123088070 123408126 107938005 107953393 106361054 106441143 106436706 8075626 102589983 102619146 100826561 107776091 107782183
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