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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g051700v5   uncharacterized protein 
 ath-u.5   AT1G04790   RING/U-box superfamily protein 
 gma-u.5   100796218   E3 ubiquitin-protein ligase RLIM 
 gma-u.5   100789823   uncharacterized LOC100789823 
 sly-u.5   101256220   uncharacterized LOC101256220 
 osa-u.5   4336379   uncharacterized LOC4336379 
 zma-u.5   103164614   Putative RING zinc finger domain superfamily protein 
 bra-r.6   103844217   zinc finger CCCH domain-containing protein 13 
 vvi-u.5   100247656   uncharacterized LOC100247656 
 ppo-u.5   7493196   uncharacterized LOC7493196 
 mtr-u.5   25483106   E3 ubiquitin-protein ligase RNF12-A 
 tae-r.2   123046140   uncharacterized LOC123046140 
 tae-r.2   123054023   uncharacterized LOC123054023 
 tae-r.2   123189911   E3 ubiquitin-protein ligase RNF12 
 hvu-r.1   123427226   E3 ubiquitin-protein ligase RNF12-like 
 ghi-r.1   107927790   uncharacterized LOC107927790 
 ghi-r.1   107957080   uncharacterized LOC107957080 
 ghi-r.1   107942319   uncharacterized LOC107942319 
 bna-r.1   106370977   zinc finger CCCH domain-containing protein 13 
 bna-r.1   106401416   E3 ubiquitin-protein ligase RLIM 
 sbi-r.1   8064467   uncharacterized LOC8064467 
 sot-r.1   102579041   E3 ubiquitin-protein ligase RNF6 
 cit-r.1   102611427   uncharacterized LOC102611427 
 bdi-r.1   100837137   uncharacterized LOC100837137 
 nta-r.1   107824910   uncharacterized LOC107824910 
 nta-r.1   107807743   uncharacterized LOC107807743 

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Top 50 coexpressed genes to CHLRE_01g051700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g051700v5 (cre-r.1 coexpression data)

CoexMap"66052168"


creCHLRE_01g051700v5 | Entrez gene ID : 66052168    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 3 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042928892.1 [sequence] [blastp]
XP_042928893.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  mito 1,  pero 1  (predict for XP_042928892.1)
nucl 6,  cyto 4  (predict for XP_042928893.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042928892.1)
other 8  (predict for XP_042928893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g051700v5
ath-u.5
for
AT1G04790
gma-u.5
for
100796218
gma-u.5
for
100789823
sly-u.5
for
101256220
osa-u.5
for
4336379
zma-u.5
for
103164614
bra-r.6
for
103844217
vvi-u.5
for
100247656
ppo-u.5
for
7493196
mtr-u.5
for
25483106
tae-r.2
for
123046140
tae-r.2
for
123054023
tae-r.2
for
123189911
hvu-r.1
for
123427226
ghi-r.1
for
107927790
ghi-r.1
for
107957080
ghi-r.1
for
107942319
bna-r.1
for
106370977
bna-r.1
for
106401416
sbi-r.1
for
8064467
sot-r.1
for
102579041
cit-r.1
for
102611427
bdi-r.1
for
100837137
nta-r.1
for
107824910
nta-r.1
for
107807743


Ortholog ID: 8260
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g051700v5 AT1G04790 LOC100796218 LOC100789823 LOC101256220 LOC4336379 LOC103164614 LOC103844217 LOC100247656 LOC7493196 LOC25483106 LOC123046140 LOC123054023 LOC123189911 LOC123427226 LOC107957080 LOC107890581 LOC107915058 LOC106370977 LOC106401416 LOC8064467 LOC102579041 LOC102611427 LOC100837137 LOC107824910 LOC107807743
Function* uncharacterized protein RING/U-box superfamily protein E3 ubiquitin-protein ligase RLIM uncharacterized LOC100789823 uncharacterized LOC101256220 uncharacterized LOC4336379 Putative RING zinc finger domain superfamily protein zinc finger CCCH domain-containing protein 13 uncharacterized LOC100247656 uncharacterized LOC7493196 E3 ubiquitin-protein ligase RNF12-A uncharacterized LOC123046140 uncharacterized LOC123054023 E3 ubiquitin-protein ligase RNF12 E3 ubiquitin-protein ligase RNF12-like uncharacterized LOC107957080 uncharacterized LOC107890581 uncharacterized LOC107915058 zinc finger CCCH domain-containing protein 13 E3 ubiquitin-protein ligase RLIM uncharacterized LOC8064467 E3 ubiquitin-protein ligase RNF6 uncharacterized LOC102611427 uncharacterized LOC100837137 uncharacterized LOC107824910 uncharacterized LOC107807743
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052168 839412 100796218 100789823 101256220 4336379 103164614 103844217 100247656 7493196 25483106 123046140 123054023 123189911 123427226 107957080 107890581 107915058 106370977 106401416 8064467 102579041 102611427 100837137 107824910 107807743
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