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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_08g364050v5   uncharacterized protein 
 ath-u.5   SWI3C   SWITCH/sucrose nonfermenting 3C 
 gma-u.5   732600   SWI/SNF complex subunit SWI3C 
 gma-u.5   100790286   SWI/SNF complex subunit SWI3C 
 gma-u.5   100792929   SWI/SNF complex subunit SWI3C 
 sly-u.5   SWI3C   SWI/SNF complex subunit SWI3C 
 osa-u.5   4349954   SWI/SNF complex subunit SWI3C 
 osa-u.5   9266524   SWI/SNF complex subunit SWI3C homolog 
 zma-u.5   100216783   Switch/sucrose nonfermenting 3C 
 zma-u.5   100279731   uncharacterized LOC100279731 
 bra-r.6   103835734   SWI/SNF complex subunit SWI3C 
 bra-r.6   103873013   SWI/SNF complex subunit SWI3C 
 vvi-u.5   100253973   SWI/SNF complex subunit SWI3C 
 ppo-u.5   18096212   SWI/SNF complex subunit SWI3C 
 ppo-u.5   7460970   SWI/SNF complex subunit SWI3C 
 mtr-u.5   11422202   SWI/SNF complex subunit SWI3C 
 tae-r.2   123096280   SWI/SNF complex subunit SWI3C homolog 
 tae-r.2   123102839   SWI/SNF complex subunit SWI3C homolog 
 tae-r.2   123111060   SWI/SNF complex subunit SWI3C homolog 
 hvu-r.1   123447935   SWI/SNF complex subunit SWI3C homolog 
 hvu-r.1   123451881   SWI/SNF complex subunit SWI3C homolog 
 ghi-r.1   121229052   SWI/SNF complex subunit SWI3C 
 ghi-r.1   107951483   SWI/SNF complex subunit SWI3C 
 ghi-r.1   107905227   SWI/SNF complex subunit SWI3C 
 bna-r.1   106425965   SWI/SNF complex subunit SWI3C 
 bna-r.1   106347379   SWI/SNF complex subunit SWI3C 
 bna-r.1   106401329   SWI/SNF complex subunit SWI3C 
 sbi-r.1   8079740   SWI/SNF complex subunit SWI3C 
 sbi-r.1   8079896   SWI/SNF complex subunit SWI3C 
 sot-r.1   102579842   SWI/SNF complex subunit SWI3C 
 cit-r.1   102615206   SWI/SNF complex subunit SWI3C 
 bdi-r.1   100826600   SWI/SNF complex subunit SWI3C 
 nta-r.1   107810873   SWI/SNF complex subunit SWI3C 
 nta-r.1   107775805   SWI/SNF complex subunit SWI3C-like 

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Top 50 coexpressed genes to CHLRE_08g364050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_08g364050v5 (cre-r.1 coexpression data)

CoexMap"66054330"


creCHLRE_08g364050v5 | Entrez gene ID : 66054330    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 1 2 2 2 1 2 1 3 2 3 3 2 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042921879.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 2,  nucl 1,  chlo_mito 1  (predict for XP_042921879.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042921879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_08g364050v5
ath-u.5
for
SWI3C
gma-u.5
for
732600
gma-u.5
for
100790286
gma-u.5
for
100792929
sly-u.5
for
SWI3C
osa-u.5
for
4349954
osa-u.5
for
9266524
zma-u.5
for
100216783
zma-u.5
for
100279731
bra-r.6
for
103835734
bra-r.6
for
103873013
vvi-u.5
for
100253973
ppo-u.5
for
18096212
ppo-u.5
for
7460970
mtr-u.5
for
11422202
tae-r.2
for
123096280
tae-r.2
for
123102839
tae-r.2
for
123111060
hvu-r.1
for
123447935
hvu-r.1
for
123451881
ghi-r.1
for
121229052
ghi-r.1
for
107951483
ghi-r.1
for
107905227
bna-r.1
for
106425965
bna-r.1
for
106347379
bna-r.1
for
106401329
sbi-r.1
for
8079740
sbi-r.1
for
8079896
sot-r.1
for
102579842
cit-r.1
for
102615206
bdi-r.1
for
100826600
nta-r.1
for
107810873
nta-r.1
for
107775805


Ortholog ID: 5202
Species cre ath gma gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot cit bdi nta nta
Symbol CHLRE_08g364050v5 SWI3C LOC100790286 LOC100792929 LOC100780440 SWI3C LOC4349954 LOC9266524 LOC100216783 LOC100279731 LOC103835734 LOC103873013 LOC100253973 LOC18096212 LOC7460970 LOC11422202 LOC123102839 LOC123111060 LOC123120070 LOC123447935 LOC123451881 LOC107951483 LOC107905227 LOC107910375 LOC106425965 LOC106401329 LOC106446602 LOC8079740 LOC8079896 LOC102579842 LOC102615206 LOC100826600 LOC107810873 LOC107775805
Function* uncharacterized protein SWITCH/sucrose nonfermenting 3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C homolog Switch/sucrose nonfermenting 3C uncharacterized LOC100279731 SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa03018 RNA degradation 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03022 Basal transcription factors 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03250 Viral life cycle - HIV-1 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 10
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66054330 838774 100790286 100792929 100780440 101264940 4349954 9266524 100216783 100279731 103835734 103873013 100253973 18096212 7460970 11422202 123102839 123111060 123120070 123447935 123451881 107951483 107905227 107910375 106425965 106401329 106446602 8079740 8079896 102579842 102615206 100826600 107810873 107775805
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