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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-u.5   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-r.7   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.9   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-e.2   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.bio   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.lig   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.str   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.tis   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-u.5   XTH5   xyloglucan endotransglucosylase/hydrolase 5 
 bra-r.6   103856036   probable xyloglucan endotransglucosylase/hydrolase protein 5 
 bra-r.6   103860348   xyloglucan endotransglucosylase/hydrolase 
 bna-r.1   111214715   probable xyloglucan endotransglucosylase/hydrolase protein 5 
 bna-r.1   106439779   xyloglucan endotransglucosylase/hydrolase 
 bna-r.1   106389424   xyloglucan endotransglucosylase/hydrolase 
 ghi-r.1   107911706   probable xyloglucan endotransglucosylase/hydrolase protein B 
 ghi-r.1   107924509   probable xyloglucan endotransglucosylase/hydrolase protein B 
 ghi-r.1   107924710   probable xyloglucan endotransglucosylase/hydrolase protein B 
 cit-r.1   102613907   xyloglucan endotransglucosylase protein 34 
 cit-r.1   102617022   xyloglucan endotransglucosylase protein 34 
 gma-u.5   100779122   xyloglucan endotransglucosylase/hydrolase protein B-like 
 gma-u.5   100813880   xyloglucan endotransglucosylase/hydrolase protein A-like 
 gma-u.5   100793686   xyloglucan endotransglucosylase/hydrolase protein A-like 
 vvi-u.5   100232906   xyloglucan endotransglucosylase protein 34 
 ppo-u.5   7497570   xyloglucan endotransglucosylase protein 34 
 ppo-u.5   7491445   xyloglucan endotransglucosylase protein 34 
 mtr-u.5   11442445   probable xyloglucan endotransglucosylase/hydrolase protein B 
 mtr-u.5   25495881   xyloglucan endotransglucosylase/hydrolase protein A 
 mtr-u.5   11439526   xyloglucan endotransglucosylase/hydrolase 1 
 sly-u.5   101260989   xyloglucan endotransglucosylase protein 2-like 
 sly-u.5   XTH1   endo-xyloglucan transferase 
 sly-u.5   XET4   xyloglucan endotransglycosylase 
 sot-r.1   102578319   probable xyloglucan endotransglucosylase/hydrolase protein 
 sot-r.1   102603929   probable xyloglucan endotransglucosylase/hydrolase 1 
 sot-r.1   102594633   xyloglucan endotransglucosylase/hydrolase protein A-like 
 nta-r.1   107808205   xyloglucan endotransglucosylase protein 2-like 
 nta-r.1   107807679   xyloglucan endotransglucosylase protein 2-like 
 nta-r.1   107785465   probable xyloglucan endotransglucosylase/hydrolase protein 
 osa-u.5   4350662   probable xyloglucan endotransglucosylase/hydrolase 
 zma-u.5   100282604   uncharacterized LOC100282604 
 tae-r.2   123175951   probable xyloglucan endotransglucosylase/hydrolase 
 tae-r.2   123096818   probable xyloglucan endotransglucosylase/hydrolase 
 hvu-r.1   123448295   probable xyloglucan endotransglucosylase/hydrolase 
 sbi-r.1   8064829   probable xyloglucan endotransglucosylase/hydrolase 
 bdi-r.1   100826179   probable xyloglucan endotransglucosylase/hydrolase 

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Top 50 coexpressed genes to XTH4 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to XTH4 (ath-m.4.hor coexpression data)

CoexMap"815247"


athXTH4 | Entrez gene ID : 815247      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 2 3 1 2 3 3 3 3 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009645 [list] [network] response to low light intensity stimulus  (20 genes)  IEP  
GO:0009612 [list] [network] response to mechanical stimulus  (28 genes)  IEP  
GO:0010089 [list] [network] xylem development  (46 genes)  IGI  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (47 genes)  IGI  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  IDA ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (25 genes)  IMP ISS  
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  ISS  
Protein NP_001325140.1 [sequence] [blastp]
NP_178708.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001325140.1)
chlo 6,  E.R. 1,  nucl 1,  extr 1,  vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_178708.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for NP_001325140.1)
scret 9  (predict for NP_178708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
XTH4
ath-u.5
for
XTH4
ath-r.7
for
XTH4
ath-m.9
for
XTH4
ath-e.2
for
XTH4
ath-m.4.bio
for
XTH4
ath-m.4.lig
for
XTH4
ath-m.4.str
for
XTH4
ath-m.4.tis
for
XTH4
ath-u.5
for
XTH5
bra-r.6
for
103856036
bra-r.6
for
103860348
bna-r.1
for
111214715
bna-r.1
for
106439779
bna-r.1
for
106389424
ghi-r.1
for
107911706
ghi-r.1
for
107924509
ghi-r.1
for
107924710
cit-r.1
for
102613907
cit-r.1
for
102617022
gma-u.5
for
100779122
gma-u.5
for
100813880
gma-u.5
for
100793686
vvi-u.5
for
100232906
ppo-u.5
for
7497570
ppo-u.5
for
7491445
mtr-u.5
for
11442445
mtr-u.5
for
25495881
mtr-u.5
for
11439526
sly-u.5
for
101260989
sly-u.5
for
XTH1
sly-u.5
for
XET4
sot-r.1
for
102578319
sot-r.1
for
102603929
sot-r.1
for
102594633
nta-r.1
for
107808205
nta-r.1
for
107807679
nta-r.1
for
107785465
osa-u.5
for
4350662
zma-u.5
for
100282604
tae-r.2
for
123175951
tae-r.2
for
123096818
hvu-r.1
for
123448295
sbi-r.1
for
8064829
bdi-r.1
for
100826179


Ortholog ID: 3544
Species ath ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa zma tae tae hvu sbi bdi
Symbol XTH4 XTH5 LOC103856036 LOC103860348 LOC106439779 LOC106443103 LOC106370596 LOC107911706 LOC107924509 LOC107945689 LOC102613907 LOC102617022 LOC100779122 LOC100813880 LOC100793686 LOC100232906 LOC7497570 LOC7491445 LOC11442445 LOC25495881 LOC25495878 LOC101260989 XTH1 XET4 LOC102578319 LOC102603929 LOC102594633 LOC107808205 LOC107807679 LOC107768220 LOC4350662 LOC100282604 LOC123175951 LOC123096818 LOC123448295 LOC8064829 LOC100826179
Function* xyloglucan endotransglucosylase/hydrolase 4 xyloglucan endotransglucosylase/hydrolase 5 probable xyloglucan endotransglucosylase/hydrolase protein 5 xyloglucan endotransglucosylase/hydrolase xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase protein 5 probable xyloglucan endotransglucosylase/hydrolase protein 5 probable xyloglucan endotransglucosylase/hydrolase protein B probable xyloglucan endotransglucosylase/hydrolase protein B probable xyloglucan endotransglucosylase/hydrolase protein B xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase/hydrolase protein B-like xyloglucan endotransglucosylase/hydrolase protein A-like xyloglucan endotransglucosylase/hydrolase protein A-like xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase protein 34 probable xyloglucan endotransglucosylase/hydrolase protein B xyloglucan endotransglucosylase/hydrolase protein A xyloglucan endotransglucosylase/hydrolase protein A xyloglucan endotransglucosylase protein 2-like endo-xyloglucan transferase xyloglucan endotransglycosylase probable xyloglucan endotransglucosylase/hydrolase protein probable xyloglucan endotransglucosylase/hydrolase 1 xyloglucan endotransglucosylase/hydrolase protein A-like xyloglucan endotransglucosylase protein 2-like xyloglucan endotransglucosylase protein 2-like probable xyloglucan endotransglucosylase/hydrolase protein probable xyloglucan endotransglucosylase/hydrolase uncharacterized LOC100282604 probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 4
ppo00562 Inositol phosphate metabolism 2
ppo00564 Glycerophospholipid metabolism 2
ppo00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 12
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 8
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04712 Circadian rhythm - plant 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00195 Photosynthesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815247 831233 103856036 103860348 106439779 106443103 106370596 107911706 107924509 107945689 102613907 102617022 100779122 100813880 100793686 100232906 7497570 7491445 11442445 25495881 25495878 101260989 544272 543626 102578319 102603929 102594633 107808205 107807679 107768220 4350662 100282604 123175951 123096818 123448295 8064829 100826179
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