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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   PAB6   poly(A) binding protein 6 
 ath-m.9   PAB6   poly(A) binding protein 6 
 ath-m.4.bio   PAB6   poly(A) binding protein 6 
 ath-m.4.lig   PAB6   poly(A) binding protein 6 
 ath-m.4.str   PAB6   poly(A) binding protein 6 
 ath-m.4.tis   PAB6   poly(A) binding protein 6 
 bna-r.1   106452213   polyadenylate-binding protein 6 
 bna-r.1   106454018   polyadenylate-binding protein 6-like 
 ghi-r.1   107895718   polyadenylate-binding protein 6 
 ghi-r.1   107913888   polyadenylate-binding protein 6 

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Top 50 coexpressed genes to PAB6 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PAB6 (ath-m.4.hor coexpression data)

CoexMap"820885"


athPAB6 | Entrez gene ID : 820885      
Species ath bna ghi ppo hvu nta cre sot bdi sbi bra cit mtr osa vvi gma tae zma sly
Paralog 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03018 [list] [network] RNA degradation (114 genes)
GO BP
GO:0006413 [list] [network] translational initiation  (23 genes)  TAS  
GO:0016071 [list] [network] mRNA metabolic process  (268 genes)  TAS  
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  ISS  
Protein NP_188259.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_188259.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188259.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
PAB6
ath-m.9
for
PAB6
ath-m.4.bio
for
PAB6
ath-m.4.lig
for
PAB6
ath-m.4.str
for
PAB6
ath-m.4.tis
for
PAB6
bna-r.1
for
106452213
bna-r.1
for
106454018
ghi-r.1
for
107895718
ghi-r.1
for
107913888


Ortholog ID: 15826
Species bna bna ghi ghi
Symbol LOC106452213 LOC106454018 LOC107895718 LOC107913888
Function* polyadenylate-binding protein 6 polyadenylate-binding protein 6-like polyadenylate-binding protein 6 polyadenylate-binding protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106452213 106454018 107895718 107913888
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