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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   VLN3   villin 3 
 ath-u.5   VLN3   villin 3 
 ath-r.7   VLN3   villin 3 
 ath-m.9   VLN3   villin 3 
 ath-e.2   VLN3   villin 3 
 ath-m.4.bio   VLN3   villin 3 
 ath-m.4.lig   VLN3   villin 3 
 ath-m.4.str   VLN3   villin 3 
 ath-m.4.tis   VLN3   villin 3 
 ath-u.5   VLN2   villin 2 
 ath-u.5   VLN4   villin 4 
 ath-u.5   VLN5   actin filament bundling protein P-115-ABP protein 
 bra-r.6   103861931   villin-4 
 bra-r.6   103834688   villin-4 
 bra-r.6   103841646   villin-3 
 bna-r.1   125609591   villin-4-like 
 bna-r.1   106401256   villin-5-like 
 bna-r.1   106401191   villin-4 
 ghi-r.1   107921145   villin-2 
 ghi-r.1   107922079   villin-3 
 ghi-r.1   107923501   villin-3 
 cit-r.1   102611628   villin-3-like 
 cit-r.1   102618228   villin-4 
 gma-u.5   100807762   villin-4 
 gma-u.5   100809968   villin-4 
 gma-u.5   100808499   villin-4 
 vvi-u.5   100243579   villin-2 
 vvi-u.5   100254775   villin-4 
 ppo-u.5   7468985   villin-3 
 ppo-u.5   7488953   villin-4 
 ppo-u.5   7496131   villin-3 
 mtr-u.5   11440584   villin-4 
 mtr-u.5   120580940   villin-3 
 mtr-u.5   11431044   villin-4 
 sly-u.5   101268090   villin-2 
 sot-r.1   102586061   villin-2 
 sot-r.1   102604247   villin-4 
 sot-r.1   102603517   villin-2 
 nta-r.1   107771362   villin-4 
 nta-r.1   107784667   villin-3 
 nta-r.1   107800296   villin-2 
 osa-u.5   4332869   villin-2-like 
 osa-u.5   4345036   villin-5-like 
 zma-u.5   103638857   villin-3 
 zma-u.5   103639123   villin-2 
 zma-u.5   103634320   villin-5 
 tae-r.2   123054391   villin-4 
 tae-r.2   123046533   villin-4 
 tae-r.2   123086053   villin-2 
 hvu-r.1   123445657   villin-3 
 hvu-r.1   123445535   villin-2-like 
 hvu-r.1   123448689   villin-2-like 
 sbi-r.1   8084077   villin-5 
 sbi-r.1   8082628   villin-2 
 bdi-r.1   100836127   villin-2 
 bdi-r.1   100835760   villin-2 
 bdi-r.1   100828345   villin-3 
 cre-r.1   CHLRE_12g555550v5   uncharacterized protein 
 cre-r.1   CHLRE_12g524400v5   uncharacterized protein 

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Top 50 coexpressed genes to VLN3 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to VLN3 (ath-m.4.hor coexpression data)

CoexMap"824908"


athVLN3 | Entrez gene ID : 824908      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 2 3 2 3 3 1 3 3 2 3 3 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051014 [list] [network] actin filament severing  (3 genes)  IDA  
GO:0051017 [list] [network] actin filament bundle assembly  (20 genes)  IDA IGI  
GO CC
GO:0005884 [list] [network] actin filament  (11 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0051015 [list] [network] actin filament binding  (34 genes)  IDA IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001319779.1 [sequence] [blastp]
NP_001325644.1 [sequence] [blastp]
NP_001325645.1 [sequence] [blastp]
NP_001325646.1 [sequence] [blastp]
NP_001325647.1 [sequence] [blastp]
NP_001325648.1 [sequence] [blastp]
NP_001325649.1 [sequence] [blastp]
NP_001325650.1 [sequence] [blastp]
NP_001325651.1 [sequence] [blastp]
NP_567048.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001319779.1)
nucl 8,  cyto 1,  vacu 1,  cysk 1  (predict for NP_001325644.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325645.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325646.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325647.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325648.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325649.1)
nucl 9  (predict for NP_001325650.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001325651.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_567048.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001319779.1)
other 8  (predict for NP_001325644.1)
other 8  (predict for NP_001325645.1)
other 8  (predict for NP_001325646.1)
other 8  (predict for NP_001325647.1)
other 8  (predict for NP_001325648.1)
other 8  (predict for NP_001325649.1)
other 8  (predict for NP_001325650.1)
other 8  (predict for NP_001325651.1)
other 8  (predict for NP_567048.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
VLN3
ath-u.5
for
VLN3
ath-r.7
for
VLN3
ath-m.9
for
VLN3
ath-e.2
for
VLN3
ath-m.4.bio
for
VLN3
ath-m.4.lig
for
VLN3
ath-m.4.str
for
VLN3
ath-m.4.tis
for
VLN3
ath-u.5
for
VLN2
ath-u.5
for
VLN4
ath-u.5
for
VLN5
bra-r.6
for
103861931
bra-r.6
for
103834688
bra-r.6
for
103841646
bna-r.1
for
125609591
bna-r.1
for
106401256
bna-r.1
for
106401191
ghi-r.1
for
107921145
ghi-r.1
for
107922079
ghi-r.1
for
107923501
cit-r.1
for
102611628
cit-r.1
for
102618228
gma-u.5
for
100807762
gma-u.5
for
100809968
gma-u.5
for
100808499
vvi-u.5
for
100243579
vvi-u.5
for
100254775
ppo-u.5
for
7468985
ppo-u.5
for
7488953
ppo-u.5
for
7496131
mtr-u.5
for
11440584
mtr-u.5
for
120580940
mtr-u.5
for
11431044
sly-u.5
for
101268090
sot-r.1
for
102586061
sot-r.1
for
102604247
sot-r.1
for
102603517
nta-r.1
for
107771362
nta-r.1
for
107784667
nta-r.1
for
107800296
osa-u.5
for
4332869
osa-u.5
for
4345036
zma-u.5
for
103638857
zma-u.5
for
103639123
zma-u.5
for
103634320
tae-r.2
for
123054391
tae-r.2
for
123046533
tae-r.2
for
123086053
hvu-r.1
for
123445657
hvu-r.1
for
123445535
hvu-r.1
for
123448689
sbi-r.1
for
8084077
sbi-r.1
for
8082628
bdi-r.1
for
100836127
bdi-r.1
for
100835760
bdi-r.1
for
100828345
cre-r.1
for
CHLRE_12g555550v5
cre-r.1
for
CHLRE_12g524400v5


Ortholog ID: 593
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol VLN3 VLN2 VLN4 LOC103834688 LOC103845171 LOC103857995 LOC106396172 LOC106411011 LOC106428163 LOC107923501 LOC107934027 LOC107917362 LOC102611628 LOC102618228 LOC100808499 LOC100788765 LOC100787208 LOC100243579 LOC100254775 LOC7468985 LOC7488953 LOC7496131 LOC120580940 LOC11431044 LOC11425184 LOC101268090 LOC101259383 LOC102586061 LOC102604247 LOC102581877 LOC107806812 LOC107813400 LOC4332869 LOC4345036 LOC100383299 LOC100279855 LOC123080735 LOC123072793 LOC123072515 LOC123445535 LOC123448689 LOC8084077 LOC8062331 LOC100836127 LOC100835760 LOC100822654 CHLRE_12g555550v5 CHLRE_12g524400v5
Function* villin 3 villin 2 villin 4 villin-4 villin-5 villin-2 villin-2 villin-4-like villin-2-like villin-3 villin-2 villin-2 villin-3-like villin-4 villin-4 villin-3 villin-3 villin-2 villin-4 villin-3 villin-4 villin-3 villin-3 villin-4 villin-3 villin-2 villin-4 villin-2 villin-4 villin-2-like villin-4 villin-3-like villin-2-like villin-5-like Villin-4 uncharacterized LOC100279855 villin-2 villin-3 villin-2 villin-2-like villin-2-like villin-5 villin-2 villin-2 villin-2 villin-5 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
ath04144 Endocytosis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04142 Lysosome 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00450 Selenocompound metabolism 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04144 Endocytosis 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
gma03013 Nucleocytoplasmic transport 4
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi04144 Endocytosis 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr00190 Oxidative phosphorylation 3
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr04144 Endocytosis 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 5
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 4
sly04141 Protein processing in endoplasmic reticulum 3
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 5
sot04144 Endocytosis 5
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04016 MAPK signaling pathway - plant 2
nta00564 Glycerophospholipid metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
osa04141 Protein processing in endoplasmic reticulum 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 8
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 5
zma05100 Bacterial invasion of epithelial cells 3
zma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03050 Proteasome 3
tae04382 Cornified envelope formation 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00510 N-Glycan biosynthesis 5
cre04141 Protein processing in endoplasmic reticulum 5
cre00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824908 818773 829139 103834688 103845171 103857995 106396172 106411011 106428163 107923501 107934027 107917362 102611628 102618228 100808499 100788765 100787208 100243579 100254775 7468985 7488953 7496131 120580940 11431044 11425184 101268090 101259383 102586061 102604247 102581877 107806812 107813400 4332869 4345036 100383299 100279855 123080735 123072793 123072515 123445535 123448689 8084077 8062331 100836127 100835760 100822654 5719738 5722520
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