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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT4G01390   TRAF-like family protein 
 ath-u.5   AT4G01390   TRAF-like family protein 
 ath-r.7   AT4G01390   TRAF-like family protein 
 ath-m.9   AT4G01390   TRAF-like family protein 
 ath-e.2   AT4G01390   TRAF-like family protein 
 ath-m.4.bio   AT4G01390   TRAF-like family protein 
 ath-m.4.lig   AT4G01390   TRAF-like family protein 
 ath-m.4.str   AT4G01390   TRAF-like family protein 
 ath-m.4.tis   AT4G01390   TRAF-like family protein 
 ath-u.5   AT5G26260   TRAF-like family protein 
 ath-u.5   AT5G26280   TRAF-like family protein 
 bna-r.1   106406191   probable inactive serine/threonine-protein kinase fnkC 
 bna-r.1   106410225   probable inactive serine/threonine-protein kinase fnkC 
 cit-r.1   102612502   MATH domain and coiled-coil domain-containing protein At1g31390-like 
 cit-r.1   102614535   uncharacterized LOC102614535 
 cit-r.1   102614700   uncharacterized LOC102614700 
 gma-u.5   100809118   MATH domain and coiled-coil domain-containing protein At3g58370 
 vvi-u.5   100265153   MATH domain and coiled-coil domain-containing protein At3g58260 
 vvi-u.5   100259955   uncharacterized LOC100259955 
 ppo-u.5   18101265   ubiquitin C-terminal hydrolase 12 
 mtr-u.5   11443727   BTB/POZ and MATH domain-containing protein 3 
 mtr-u.5   11436579   uncharacterized LOC11436579 
 sot-r.1   102601751   uncharacterized LOC102601751 
 nta-r.1   107769522   uncharacterized LOC107769522 
 nta-r.1   107783072   BTB/POZ and MATH domain-containing protein 2-like 
 cre-r.1   CHLRE_06g278131v5   uncharacterized protein 
 cre-r.1   CHLRE_06g278133v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G01390 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G01390 (ath-m.4.hor coexpression data)

CoexMap""


athAT4G01390 | Entrez gene ID : 828075      
Species ath bna cit gma vvi ppo mtr sot nta cre tae bdi hvu sly zma osa sbi bra ghi
Paralog 11 2 3 1 2 1 2 1 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function TRAF-like family protein
KEGG
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
Protein NP_192048.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1  (predict for NP_192048.2)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_192048.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT4G01390
ath-u.5
for
AT4G01390
ath-r.7
for
AT4G01390
ath-m.9
for
AT4G01390
ath-e.2
for
AT4G01390
ath-m.4.bio
for
AT4G01390
ath-m.4.lig
for
AT4G01390
ath-m.4.str
for
AT4G01390
ath-m.4.tis
for
AT4G01390
ath-u.5
for
AT5G26260
ath-u.5
for
AT5G26280
bna-r.1
for
106406191
bna-r.1
for
106410225
cit-r.1
for
102612502
cit-r.1
for
102614535
cit-r.1
for
102614700
gma-u.5
for
100809118
vvi-u.5
for
100265153
vvi-u.5
for
100259955
ppo-u.5
for
18101265
mtr-u.5
for
11443727
mtr-u.5
for
11436579
sot-r.1
for
102601751
nta-r.1
for
107769522
nta-r.1
for
107783072
cre-r.1
for
CHLRE_06g278131v5
cre-r.1
for
CHLRE_06g278133v5

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Ortholog ID: 214
Species ath bna bna cit cit cit gma vvi ppo mtr mtr sot nta nta nta cre cre
Symbol AT3G17380 LOC106379270 LOC106359818 LOC102614535 LOC127902215 LOC127902212 LOC100809118 LOC100259955 LOC18101265 LOC11443727 LOC11436579 LOC102601751 LOC107816787 LOC107764797 LOC142181684 CHLRE_06g278131v5 CHLRE_06g278133v5
Function* TRAF-like family protein uncharacterized LOC106379270 uncharacterized LOC106359818 uncharacterized LOC102614535 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 12-like MATH domain and coiled-coil domain-containing protein At3g58370 uncharacterized LOC100259955 ubiquitin C-terminal hydrolase 12 BTB/POZ and MATH domain-containing protein 3 uncharacterized LOC11436579 uncharacterized LOC102601751 ubiquitin C-terminal hydrolase 12-like uncharacterized LOC107764797 uncharacterized LOC142181684 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
mtr00052 Galactose metabolism 2
mtr00500 Starch and sucrose metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00053 Ascorbate and aldarate metabolism 2
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821002 106379270 106359818 102614535 127902215 127902212 100809118 100259955 18101265 11443727 11436579 102601751 107816787 107764797 142181684 5723583 66053687
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