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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-u.5   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-r.7   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-m.9   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-e.2   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-m.4.bio   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-m.4.lig   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-m.4.str   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-m.4.tis   AT5G47970   Aldolase-type TIM barrel family protein 
 ath-u.5   AT3G63510   FMN-linked oxidoreductases superfamily protein 
 bra-r.6   103831645   tRNA-dihydrouridine(20/20a) synthase 
 bra-r.6   103874921   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   106354130   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   106348961   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   111198707   tRNA-dihydrouridine(20/20a) synthase-like 
 ghi-r.1   107899250   tRNA-dihydrouridine(20/20a) synthase 
 ghi-r.1   107938347   tRNA-dihydrouridine(20/20a) synthase 
 ghi-r.1   107900753   tRNA-dihydrouridine(20/20a) synthase 
 cit-r.1   102613387   uncharacterized LOC102613387 
 gma-u.5   100808450   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100785422   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100779457   tRNA-dihydrouridine(20/20a) synthase 
 vvi-u.5   100248175   uncharacterized LOC100248175 
 ppo-u.5   7482287   uncharacterized LOC7482287 
 ppo-u.5   7480072   uncharacterized LOC7480072 
 mtr-u.5   11428385   tRNA-dihydrouridine(20/20a) synthase 
 mtr-u.5   25491953   tRNA-dihydrouridine(20/20a) synthase 
 sly-u.5   101248235   uncharacterized LOC101248235 
 sot-r.1   102587801   tRNA-dihydrouridine(20/20a) synthase-like 
 sot-r.1   102587473   tRNA-dihydrouridine(20/20a) synthase-like 
 nta-r.1   107830269   uncharacterized LOC107830269 
 nta-r.1   107804416   uncharacterized LOC107804416 
 osa-u.5   4335364   uncharacterized LOC4335364 
 zma-u.5   100273106   uncharacterized LOC100273106 
 tae-r.2   123053011   tRNA-dihydrouridine(20/20a) synthase 
 tae-r.2   123188925   tRNA-dihydrouridine(20/20a) synthase 
 tae-r.2   123045176   tRNA-dihydrouridine(20/20a) synthase 
 hvu-r.1   123426401   tRNA-dihydrouridine(20/20a) synthase-like 
 sbi-r.1   8086466   tRNA-dihydrouridine(20/20a) synthase 
 bdi-r.1   100823232   tRNA-dihydrouridine(20/20a) synthase 
 cre-r.1   CHLRE_15g636896v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G47970 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47970 (ath-m.4.hor coexpression data)

CoexMap"834848"


athAT5G47970 | Entrez gene ID : 834848      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 1 2 2 1 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009524 [list] [network] phragmoplast  (72 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (3 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (71 genes)  IEA  
Protein NP_001078731.1 [sequence] [blastp]
NP_001331912.1 [sequence] [blastp]
NP_199608.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  cysk 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001078731.1)
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2  (predict for NP_001331912.1)
chlo 5,  cyto 2,  cysk 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_199608.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078731.1)
other 8  (predict for NP_001331912.1)
other 8  (predict for NP_199608.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.hor
for
AT5G47970
ath-u.5
for
AT5G47970
ath-r.7
for
AT5G47970
ath-m.9
for
AT5G47970
ath-e.2
for
AT5G47970
ath-m.4.bio
for
AT5G47970
ath-m.4.lig
for
AT5G47970
ath-m.4.str
for
AT5G47970
ath-m.4.tis
for
AT5G47970
ath-u.5
for
AT3G63510
bra-r.6
for
103831645
bra-r.6
for
103874921
bna-r.1
for
106354130
bna-r.1
for
106348961
bna-r.1
for
111198707
ghi-r.1
for
107899250
ghi-r.1
for
107938347
ghi-r.1
for
107900753
cit-r.1
for
102613387
gma-u.5
for
100808450
gma-u.5
for
100785422
gma-u.5
for
100779457
vvi-u.5
for
100248175
ppo-u.5
for
7482287
ppo-u.5
for
7480072
mtr-u.5
for
11428385
mtr-u.5
for
25491953
sly-u.5
for
101248235
sot-r.1
for
102587801
sot-r.1
for
102587473
nta-r.1
for
107830269
nta-r.1
for
107804416
osa-u.5
for
4335364
zma-u.5
for
100273106
tae-r.2
for
123053011
tae-r.2
for
123188925
tae-r.2
for
123045176
hvu-r.1
for
123426401
sbi-r.1
for
8086466
bdi-r.1
for
100823232
cre-r.1
for
CHLRE_15g636896v5


Ortholog ID: 6027
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G47970 AT3G63510 LOC103831645 LOC103874921 LOC106354130 LOC106348961 LOC111198707 LOC107899250 LOC107938347 LOC107900753 LOC102613387 LOC100808450 LOC100785422 LOC100779457 LOC100248175 LOC7482287 LOC7480072 LOC11428385 LOC25491953 LOC101248235 LOC102587801 LOC102587473 LOC107830269 LOC107804416 LOC4335364 LOC100273106 LOC123053011 LOC123188925 LOC123045176 LOC123426401 LOC8086466 LOC100823232 CHLRE_15g636896v5
Function* Aldolase-type TIM barrel family protein FMN-linked oxidoreductases superfamily protein tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC102613387 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC100248175 uncharacterized LOC7482287 uncharacterized LOC7480072 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC101248235 tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase-like uncharacterized LOC107830269 uncharacterized LOC107804416 uncharacterized LOC4335364 uncharacterized LOC100273106 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 3
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae03018 RNA degradation 3
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834848 825526 103831645 103874921 106354130 106348961 111198707 107899250 107938347 107900753 102613387 100808450 100785422 100779457 100248175 7482287 7480072 11428385 25491953 101248235 102587801 102587473 107830269 107804416 4335364 100273106 123053011 123188925 123045176 123426401 8086466 100823232 5726167
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