Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110434435   protein CROWDED NUCLEI 1 
 zma-u.5   103653975   protein CROWDED NUCLEI 1 
 osa-u.5   4330487   protein CROWDED NUCLEI 1 
 tae-r.2   123137957   nuclear matrix constituent protein 1a 
 tae-r.2   123145256   nuclear matrix constituent protein 1a 
 tae-r.2   123128155   nuclear matrix constituent protein 1a 
 hvu-r.1   123401394   nuclear matrix constituent protein 1a 
 bdi-r.1   100829196   protein CROWDED NUCLEI 1 
 ath-u.5   LINC2   nuclear matrix constituent protein-like protein 
 ath-u.5   LINC1   little nuclei1 
 ath-u.5   LINC3   little nuclei3 
 gma-u.5   100803601   protein CROWDED NUCLEI 1 
 gma-u.5   100816589   protein CROWDED NUCLEI 3 
 gma-u.5   100805888   protein CROWDED NUCLEI 2 
 sly-u.5   101264275   nuclear matrix constituent protein 1 
 sly-u.5   101255471   nuclear matrix constituent protein 1-like 
 bra-r.6   103871951   protein CROWDED NUCLEI 2 
 bra-r.6   103852383   protein CROWDED NUCLEI 1 
 bra-r.6   103831155   protein CROWDED NUCLEI 1 
 vvi-u.5   100248029   nuclear matrix constituent protein 1 
 vvi-u.5   100242259   nuclear matrix constituent protein 1 
 ppo-u.5   7485949   nuclear matrix constituent protein 1 
 ppo-u.5   18107408   protein CROWDED NUCLEI 1 
 mtr-u.5   25495346   protein CROWDED NUCLEI 3 
 mtr-u.5   25497658   protein CROWDED NUCLEI 1 
 ghi-r.1   107957217   protein CROWDED NUCLEI 1 
 ghi-r.1   107934791   protein CROWDED NUCLEI 2 
 ghi-r.1   107916647   protein CROWDED NUCLEI 1 
 bna-r.1   106346438   protein CROWDED NUCLEI 2 
 bna-r.1   106391961   protein CROWDED NUCLEI 1 
 bna-r.1   106381050   protein CROWDED NUCLEI 1 
 sot-r.1   102581630   protein CROWDED NUCLEI 1-like 
 sot-r.1   102583890   protein CROWDED NUCLEI 1-like 
 cit-r.1   102625465   protein CROWDED NUCLEI 1 
 cit-r.1   102617982   nuclear matrix constituent protein 1 
 nta-r.1   107815144   nuclear matrix constituent protein 1-like 
 nta-r.1   107793731   nuclear matrix constituent protein 1 
 nta-r.1   107770458   nuclear matrix constituent protein 1 

close


Top 50 coexpressed genes to 110434435 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 110434435 (sbi-r.1 coexpression data)

CoexMap""


sbiLOC110434435 | Entrez gene ID : 110434435    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 3 3 2 3 2 2 2 3 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function protein CROWDED NUCLEI 1
KEGG
GO BP
GO:0006997 [list] [network] nucleus organization  (15 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
Protein XP_021314145.1 [sequence] [blastp]
XP_021314146.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 3  (predict for XP_021314145.1)
nucl 4,  chlo 3,  cyto 3  (predict for XP_021314146.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_021314145.1)
mito 5  (predict for XP_021314146.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110434435
zma-u.5
for
103653975
osa-u.5
for
4330487
tae-r.2
for
123137957
tae-r.2
for
123145256
tae-r.2
for
123128155
hvu-r.1
for
123401394
bdi-r.1
for
100829196
ath-u.5
for
LINC2
ath-u.5
for
LINC1
ath-u.5
for
LINC3
gma-u.5
for
100803601
gma-u.5
for
100816589
gma-u.5
for
100805888
sly-u.5
for
101264275
sly-u.5
for
101255471
bra-r.6
for
103871951
bra-r.6
for
103852383
bra-r.6
for
103831155
vvi-u.5
for
100248029
vvi-u.5
for
100242259
ppo-u.5
for
7485949
ppo-u.5
for
18107408
mtr-u.5
for
25495346
mtr-u.5
for
25497658
ghi-r.1
for
107957217
ghi-r.1
for
107934791
ghi-r.1
for
107916647
bna-r.1
for
106346438
bna-r.1
for
106391961
bna-r.1
for
106381050
sot-r.1
for
102581630
sot-r.1
for
102583890
cit-r.1
for
102625465
cit-r.1
for
102617982
nta-r.1
for
107815144
nta-r.1
for
107793731
nta-r.1
for
107770458

Please wait a moment.



Ortholog ID: 3513
Species sbi zma osa tae tae tae hvu bdi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC110434435 LOC103653975 LOC4330487 LOC123137957 LOC123145256 LOC123128155 LOC123401394 LOC100829196 LINC2 LINC1 LINC3 LOC100803601 LOC100805888 LOC100802673 LOC101264275 LOC101255471 LOC103871951 LOC103852383 LOC103831155 LOC100248029 LOC100242259 LOC7485949 LOC18107408 LOC25495346 LOC25497658 LOC107934791 LOC107916647 LOC107946462 LOC106357605 LOC106401090 LOC106353927 LOC102581630 LOC102583890 LOC102625465 LOC102617982 LOC107793731 LOC107770458 LOC107778685
Function* protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1a nuclear matrix constituent protein 1a nuclear matrix constituent protein 1a nuclear matrix constituent protein 1a protein CROWDED NUCLEI 1 nuclear matrix constituent protein-like protein little nuclei1 little nuclei3 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1-like protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 3 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 3 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1-like protein CROWDED NUCLEI 1-like protein CROWDED NUCLEI 1-like protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00310 Lysine degradation 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110434435 103653975 4330487 123137957 123145256 123128155 123401394 100829196 837882 843043 843210 100803601 100805888 100802673 101264275 101255471 103871951 103852383 103831155 100248029 100242259 7485949 18107408 25495346 25497658 107934791 107916647 107946462 106357605 106401090 106353927 102581630 102583890 102625465 102617982 107793731 107770458 107778685
The preparation time of this page was 0.1 [sec].