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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103852383   protein CROWDED NUCLEI 1 
 ath-u.5   LINC2   nuclear matrix constituent protein-like protein 
 ath-u.5   LINC1   little nuclei1 
 ath-u.5   LINC3   little nuclei3 
 gma-u.5   100816589   protein CROWDED NUCLEI 3 
 gma-u.5   100803601   protein CROWDED NUCLEI 1 
 gma-u.5   100802673   protein CROWDED NUCLEI 1 
 vvi-u.5   100248029   nuclear matrix constituent protein 1 
 vvi-u.5   100242259   nuclear matrix constituent protein 1 
 ppo-u.5   7485949   nuclear matrix constituent protein 1 
 ppo-u.5   18107408   protein CROWDED NUCLEI 1 
 mtr-u.5   25495346   protein CROWDED NUCLEI 3 
 mtr-u.5   25497658   protein CROWDED NUCLEI 1 
 sly-u.5   101264275   nuclear matrix constituent protein 1 
 sly-u.5   101255471   nuclear matrix constituent protein 1-like 
 osa-u.5   4330487   protein CROWDED NUCLEI 1 
 zma-u.5   103653975   protein CROWDED NUCLEI 1 

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Top 50 coexpressed genes to 103852383 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103852383 (bra-r.6 coexpression data)

CoexMap"103852383"


braLOC103852383 | Entrez gene ID : 103852383    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 3 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006997 [list] [network] nucleus organization  (27 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
Protein XP_009127537.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for XP_009127537.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_009127537.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103852383
ath-u.5
for
LINC2
ath-u.5
for
LINC1
ath-u.5
for
LINC3
gma-u.5
for
100816589
gma-u.5
for
100803601
gma-u.5
for
100802673
vvi-u.5
for
100248029
vvi-u.5
for
100242259
ppo-u.5
for
7485949
ppo-u.5
for
18107408
mtr-u.5
for
25495346
mtr-u.5
for
25497658
sly-u.5
for
101264275
sly-u.5
for
101255471
osa-u.5
for
4330487
zma-u.5
for
103653975


Ortholog ID: 3513
Species bra bra bna bna ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103852383 LOC103831155 LOC106353927 LOC106401090 LINC1 LINC3 LOC107934791 LOC107916647 LOC102617982 LOC102625465 LOC100805888 LOC100803601 LOC100242259 LOC100248029 LOC18107408 LOC7485949 LOC25495346 LOC25497658 LOC101255471 LOC101264275 LOC102583890 LOC102581630 LOC107793731 LOC107770458 LOC4330487 LOC103653975 LOC123145256 LOC123128155 LOC123401394 LOC110434435 LOC100829196
Function* protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1-like protein CROWDED NUCLEI 2 little nuclei1 little nuclei3 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 2 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1 protein CROWDED NUCLEI 3 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1-like nuclear matrix constituent protein 1 protein CROWDED NUCLEI 1-like protein CROWDED NUCLEI 1-like nuclear matrix constituent protein 1 nuclear matrix constituent protein 1 protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1 nuclear matrix constituent protein 1a nuclear matrix constituent protein 1a nuclear matrix constituent protein 1a protein CROWDED NUCLEI 1 protein CROWDED NUCLEI 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00310 Lysine degradation 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103852383 103831155 106353927 106401090 843043 843210 107934791 107916647 102617982 102625465 100805888 100803601 100242259 100248029 18107408 7485949 25495346 25497658 101255471 101264275 102583890 102581630 107793731 107770458 4330487 103653975 123145256 123128155 123401394 110434435 100829196
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