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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073879   60S ribosomal protein L12-1 
 sbi-r.1   8072021   60S ribosomal protein L12-1 
 sbi-r.1   8071107   60S ribosomal protein L12-1 
 zma-u.5   100281960   60S ribosomal protein L12 
 zma-u.5   103641586   60S ribosomal protein L12 
 zma-u.5   100282351   60S ribosomal protein L12-like 
 osa-u.5   4330425   large ribosomal subunit protein uL11z 
 osa-u.5   4336856   large ribosomal subunit protein uL11 
 tae-r.2   123046594   60S ribosomal protein L12-3 
 tae-r.2   123054463   60S ribosomal protein L12-3 
 tae-r.2   123128089   60S ribosomal protein L12-3 
 hvu-r.1   123427762   60S ribosomal protein L12-3-like 
 hvu-r.1   123401220   60S ribosomal protein L12-3 
 bdi-r.1   100839364   60S ribosomal protein L12-3 
 bdi-r.1   100839822   60S ribosomal protein L12-3 
 ath-u.5   AT2G37190   Ribosomal protein L11 family protein 
 ath-u.5   AT3G53430   Ribosomal protein L11 family protein 
 ath-u.5   AT5G60670   Ribosomal protein L11 family protein 
 gma-u.5   100789561   60S ribosomal protein L12 
 gma-u.5   100527860   60S ribosomal protein L12 
 gma-u.5   100811654   ribosomal protein L11 family protein 
 sly-u.5   101247691   large ribosomal subunit protein uL11 
 sly-u.5   101259021   large ribosomal subunit protein uL11 
 sly-u.5   101262318   large ribosomal subunit protein uL11 
 bra-r.6   103865580   60S ribosomal protein L12-2 
 bra-r.6   103863412   60S ribosomal protein L12-2 
 bra-r.6   103863417   60S ribosomal protein L12-2 
 vvi-u.5   100853149   large ribosomal subunit protein uL11 
 vvi-u.5   100267052   60S ribosomal protein L12-like 
 vvi-u.5   100244384   60S ribosomal protein L12-like 
 ppo-u.5   18107840   60S ribosomal protein L12 
 ppo-u.5   18107841   60S ribosomal protein L12 
 mtr-u.5   11412068   60S ribosomal protein L12-3 
 mtr-u.5   25484005   60S ribosomal protein L12 
 ghi-r.1   107962779   60S ribosomal protein L12-3 
 ghi-r.1   107961938   60S ribosomal protein L12-3 
 ghi-r.1   107963874   60S ribosomal protein L12-3 
 bna-r.1   111205369   60S ribosomal protein L12-3-like 
 bna-r.1   125585594   60S ribosomal protein L12-2 
 bna-r.1   106452453   60S ribosomal protein L12-2-like 
 sot-r.1   102600463   60S ribosomal protein L12-like 
 sot-r.1   102589601   60S ribosomal protein L12 
 cit-r.1   102627399   60S ribosomal protein L12 
 cit-r.1   102610083   60S ribosomal protein L12 
 nta-r.1   107787930   large ribosomal subunit protein uL11-like 
 nta-r.1   107764287   large ribosomal subunit protein uL11 
 nta-r.1   107820787   large ribosomal subunit protein uL11 
 cre-r.1   CHLRE_12g528750v5   ribosomal protein L12 

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Top 50 coexpressed genes to 8073879 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073879 (sbi-r.1 coexpression data)

CoexMap"8073879"


sbiLOC8073879 | Entrez gene ID : 8073879    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 3 2 2 3 3 3 3 3 2 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (12 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002454433.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for XP_002454433.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002454433.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073879
sbi-r.1
for
8072021
sbi-r.1
for
8071107
zma-u.5
for
100281960
zma-u.5
for
103641586
zma-u.5
for
100282351
osa-u.5
for
4330425
osa-u.5
for
4336856
tae-r.2
for
123046594
tae-r.2
for
123054463
tae-r.2
for
123128089
hvu-r.1
for
123427762
hvu-r.1
for
123401220
bdi-r.1
for
100839364
bdi-r.1
for
100839822
ath-u.5
for
AT2G37190
ath-u.5
for
AT3G53430
ath-u.5
for
AT5G60670
gma-u.5
for
100789561
gma-u.5
for
100527860
gma-u.5
for
100811654
sly-u.5
for
101247691
sly-u.5
for
101259021
sly-u.5
for
101262318
bra-r.6
for
103865580
bra-r.6
for
103863412
bra-r.6
for
103863417
vvi-u.5
for
100853149
vvi-u.5
for
100267052
vvi-u.5
for
100244384
ppo-u.5
for
18107840
ppo-u.5
for
18107841
mtr-u.5
for
11412068
mtr-u.5
for
25484005
ghi-r.1
for
107962779
ghi-r.1
for
107961938
ghi-r.1
for
107963874
bna-r.1
for
111205369
bna-r.1
for
125585594
bna-r.1
for
106452453
sot-r.1
for
102600463
sot-r.1
for
102589601
cit-r.1
for
102627399
cit-r.1
for
102610083
nta-r.1
for
107787930
nta-r.1
for
107764287
nta-r.1
for
107820787
cre-r.1
for
CHLRE_12g528750v5


Ortholog ID: 1378
Species sbi sbi sbi zma zma zma osa osa tae tae tae hvu hvu bdi bdi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC8073879 LOC8072021 LOC8071107 LOC100281960 LOC100284082 LOC100216970 LOC4330425 LOC4336856 LOC123128089 LOC123137876 LOC123190327 LOC123427762 LOC123401220 LOC100839364 LOC100839822 AT2G37190 AT3G53430 AT5G60670 LOC100789561 LOC100527860 LOC100811654 LOC101247691 LOC101259021 LOC101262318 LOC103863412 LOC103863417 LOC103845481 LOC100853149 LOC100267052 LOC100244384 LOC18107840 LOC18109584 LOC7485512 LOC11412068 LOC25484005 LOC107940123 LOC107930650 LOC106371617 LOC106441066 LOC106447395 LOC102600463 LOC102589601 LOC102627399 LOC102610083 LOC107787930 LOC107764287 LOC107763560 CHLRE_12g528750v5
Function* 60S ribosomal protein L12-1 60S ribosomal protein L12-1 60S ribosomal protein L12-1 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12-3 large ribosomal subunit protein uL11z large ribosomal subunit protein uL11 60S ribosomal protein L12-3 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12-3-like 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-3 Ribosomal protein L11 family protein Ribosomal protein L11 family protein Ribosomal protein L11 family protein 60S ribosomal protein L12 60S ribosomal protein L12 ribosomal protein L11 family protein large ribosomal subunit protein uL11 large ribosomal subunit protein uL11 large ribosomal subunit protein uL11 60S ribosomal protein L12-2 60S ribosomal protein L12-2 60S ribosomal protein L12-3 large ribosomal subunit protein uL11 60S ribosomal protein L12-like 60S ribosomal protein L12-like 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-3 60S ribosomal protein L12-2-like 60S ribosomal protein L12-2-like 60S ribosomal protein L12-like 60S ribosomal protein L12 60S ribosomal protein L12 60S ribosomal protein L12 large ribosomal subunit protein uL11-like large ribosomal subunit protein uL11 large ribosomal subunit protein uL11 ribosomal protein L12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi03015 mRNA surveillance pathway 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta01250 Biosynthesis of nucleotide sugars 3
nta00860 Porphyrin metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00860 Porphyrin metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8073879 8072021 8071107 100281960 100284082 100216970 4330425 4336856 123128089 123137876 123190327 123427762 123401220 100839364 100839822 818295 824511 836188 100789561 100527860 100811654 101247691 101259021 101262318 103863412 103863417 103845481 100853149 100267052 100244384 18107840 18109584 7485512 11412068 25484005 107940123 107930650 106371617 106441066 106447395 102600463 102589601 102627399 102610083 107787930 107764287 107763560 5722438
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