ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100527860	60S ribosomal protein L12
gma-r.7	100527860	60S ribosomal protein L12
gma-m.5	100527860	60S ribosomal protein L12
gma-u.5	100792317	60S ribosomal protein L12
gma-u.5	100811654	ribosomal protein L11 family protein
gma-u.5	100789561	60S ribosomal protein L12
mtr-u.5	11412068	60S ribosomal protein L12-3
mtr-u.5	25484005	60S ribosomal protein L12
ppo-u.5	18109584	60S ribosomal protein L12
ppo-u.5	7485512	60S ribosomal protein L12
ath-u.5	AT2G37190	Ribosomal protein L11 family protein
ath-u.5	AT3G53430	Ribosomal protein L11 family protein
ath-u.5	AT5G60670	Ribosomal protein L11 family protein
vvi-u.5	100267052	60S ribosomal protein L12-like
vvi-u.5	100853149	large ribosomal subunit protein uL11
vvi-u.5	100244384	60S ribosomal protein L12-like
sly-u.5	101262318	large ribosomal subunit protein uL11
sly-u.5	101247691	large ribosomal subunit protein uL11
sly-u.5	101259021	large ribosomal subunit protein uL11
osa-u.5	4330425	large ribosomal subunit protein uL11z
osa-u.5	4336856	large ribosomal subunit protein uL11
zma-u.5	100281960	60S ribosomal protein L12
zma-u.5	100282351	60S ribosomal protein L12-like
zma-u.5	100284082	60S ribosomal protein L12

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0006412 [list] [network] translation

(852 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(230 genes)	IEA
GO:0005840 [list] [network] ribosome	(633 genes)	IEA

GO MF

GO:0070180 [list] [network] large ribosomal subunit rRNA binding	(17 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(610 genes)	IEA

Protein

NP_001238575.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9

(predict for NP_001238575.2)

Subcellular
localization
TargetP

other 7

(predict for NP_001238575.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100527860	gma-r.7 for 100527860	gma-m.5 for 100527860	gma-u.5 for 100792317	gma-u.5 for 100811654	gma-u.5 for 100789561	mtr-u.5 for 11412068	mtr-u.5 for 25484005	ppo-u.5 for 18109584	ppo-u.5 for 7485512	ath-u.5 for AT2G37190	ath-u.5 for AT3G53430	ath-u.5 for AT5G60670	vvi-u.5 for 100267052	vvi-u.5 for 100853149	vvi-u.5 for 100244384	sly-u.5 for 101262318	sly-u.5 for 101247691	sly-u.5 for 101259021	osa-u.5 for 4330425	osa-u.5 for 4336856	zma-u.5 for 100281960	zma-u.5 for 100282351	zma-u.5 for 100284082

Ortholog

Ortholog ID: 1378

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

60S ribosomal protein L12

ribosomal protein L11 family protein

60S ribosomal protein L12-3

60S ribosomal protein L12

Ribosomal protein L11 family protein

60S ribosomal protein L12-3

60S ribosomal protein L12-2

60S ribosomal protein L12-like

large ribosomal subunit protein uL11

60S ribosomal protein L12-3

60S ribosomal protein L12-2-like

60S ribosomal protein L12

large ribosomal subunit protein uL11

60S ribosomal protein L12-like

60S ribosomal protein L12

large ribosomal subunit protein uL11

large ribosomal subunit protein uL11z

large ribosomal subunit protein uL11

60S ribosomal protein L12

60S ribosomal protein L12-3

60S ribosomal protein L12-3-like

60S ribosomal protein L12-1

60S ribosomal protein L12-3

ribosomal protein L12

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	16
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	16
ghi03015	mRNA surveillance pathway	3
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	7
nta00860	Porphyrin metabolism	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	16
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

100789561

100811654

11412068

7485512

18109584

836188

818295

103845481

103863412

100267052

100853149

107930650

106371617

106447395

102627399

102610083

101259021

101247691

102600463

102589601

107764287

107763560

4330425

4336856

100281960

100216970

123128089

123190327

123401220

123427762

8072021

8073879

100839822

100839364

5722438

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100527860 (gma-u.5 coexpression data)

Top 50 enrichment test to 100527860 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	2	2	3	3	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100527860 (gma-u.5 coexpression data)

Top 50 enrichment test to 100527860 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**