Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074787   surfeit locus protein 6 homolog 
 zma-u.5   103627451   rRNA-processing protein 14 
 osa-u.5   4338593   ribosomal RNA-processing protein 14-C 
 tae-r.2   123127693   ribosomal RNA-processing protein 14 
 tae-r.2   123144898   ribosomal RNA-processing protein 14 
 tae-r.2   123137579   ribosomal RNA-processing protein 14 
 hvu-r.1   123401622   ribosomal RNA-processing protein 14 
 bdi-r.1   100825057   ribosomal RNA-processing protein 14-C 
 bdi-r.1   100820931   ribosomal RNA-processing protein 14-C 
 ath-u.5   AT5G05210   Surfeit locus protein 6 
 gma-u.5   100798662   surfeit locus protein 6 
 gma-u.5   100781353   ribosomal RNA-processing protein 14-C-like 
 sly-u.5   101246009   ribosomal RNA-processing protein 14-C 
 bra-r.6   103850575   ribosomal RNA-processing protein 14 
 bra-r.6   103855622   ribosomal RNA-processing protein 14 
 vvi-u.5   100263152   uncharacterized LOC100263152 
 ppo-u.5   7475431   uncharacterized LOC7475431 
 mtr-u.5   11436486   surfeit locus protein 6 
 ghi-r.1   107943112   ribosomal RNA-processing protein 14 
 ghi-r.1   107929135   surfeit locus protein 6 homolog 
 bna-r.1   106380847   ribosomal RNA-processing protein 14-like 
 bna-r.1   106382979   ribosomal RNA-processing protein 14-like 
 bna-r.1   106428021   ribosomal RNA-processing protein 14 
 sot-r.1   102595193   ribosomal RNA-processing protein 14-C-like 
 cit-r.1   102612211   uncharacterized LOC102612211 
 nta-r.1   107821668   uncharacterized LOC107821668 
 nta-r.1   107828845   uncharacterized LOC107828845 
 cre-r.1   CHLRE_02g082300v5   uncharacterized protein 

close


Top 50 coexpressed genes to 8074787 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8074787 (sbi-r.1 coexpression data)

CoexMap"8074787"


sbiLOC8074787 | Entrez gene ID : 8074787      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 2 1 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (75 genes)  IEA  
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (81 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
Protein XP_002454217.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_002454217.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_002454217.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074787
zma-u.5
for
103627451
osa-u.5
for
4338593
tae-r.2
for
123127693
tae-r.2
for
123144898
tae-r.2
for
123137579
hvu-r.1
for
123401622
bdi-r.1
for
100825057
bdi-r.1
for
100820931
ath-u.5
for
AT5G05210
gma-u.5
for
100798662
gma-u.5
for
100781353
sly-u.5
for
101246009
bra-r.6
for
103850575
bra-r.6
for
103855622
vvi-u.5
for
100263152
ppo-u.5
for
7475431
mtr-u.5
for
11436486
ghi-r.1
for
107943112
ghi-r.1
for
107929135
bna-r.1
for
106380847
bna-r.1
for
106382979
bna-r.1
for
106428021
sot-r.1
for
102595193
cit-r.1
for
102612211
nta-r.1
for
107821668
nta-r.1
for
107828845
cre-r.1
for
CHLRE_02g082300v5


Ortholog ID: 7518
Species sbi zma osa tae tae tae hvu bdi bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC8074787 LOC103627451 LOC4338593 LOC123127693 LOC123144898 LOC123137579 LOC123401622 LOC100825057 LOC100820931 AT5G05210 LOC100798662 LOC100781353 LOC101246009 LOC103850575 LOC103855622 LOC100263152 LOC7475431 LOC11436486 LOC107943112 LOC107929135 LOC106380847 LOC106382979 LOC106428021 LOC102595193 LOC102612211 LOC107821668 LOC107828845 CHLRE_02g082300v5
Function* surfeit locus protein 6 homolog rRNA-processing protein 14 ribosomal RNA-processing protein 14-C ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14-C ribosomal RNA-processing protein 14-C Surfeit locus protein 6 surfeit locus protein 6 ribosomal RNA-processing protein 14-C-like ribosomal RNA-processing protein 14-C ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 uncharacterized LOC100263152 uncharacterized LOC7475431 surfeit locus protein 6 ribosomal RNA-processing protein 14 surfeit locus protein 6 homolog ribosomal RNA-processing protein 14-like ribosomal RNA-processing protein 14-like ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14-C-like uncharacterized LOC102612211 uncharacterized LOC107821668 uncharacterized LOC107828845 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8074787 103627451 4338593 123127693 123144898 123137579 123401622 100825057 100820931 830403 100798662 100781353 101246009 103850575 103855622 100263152 7475431 11436486 107943112 107929135 106380847 106382979 106428021 102595193 102612211 107821668 107828845 5727325
The preparation time of this page was 0.1 [sec].