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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11436486   surfeit locus protein 6 
 mtr-r.5   11436486   surfeit locus protein 6 
 mtr-m.5   11436486   surfeit locus protein 6 
 gma-u.5   100798662   surfeit locus protein 6 
 gma-u.5   100781353   ribosomal RNA-processing protein 14-C-like 
 ppo-u.5   7475431   uncharacterized LOC7475431 
 ath-u.5   AT5G05210   Surfeit locus protein 6 
 vvi-u.5   100263152   uncharacterized LOC100263152 
 sly-u.5   101246009   ribosomal RNA-processing protein 14-C 
 osa-u.5   4338593   ribosomal RNA-processing protein 14-C 
 zma-u.5   103627451   rRNA-processing protein 14 

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Top 50 coexpressed genes to 11436486 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11436486 (mtr-u.5 coexpression data)

CoexMap"11436486"


mtrLOC11436486 | Entrez gene ID : 11436486      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (58 genes)  IEA  
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (79 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (210 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_003611326.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_003611326.2)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_003611326.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11436486

.
mtr-r.5
for
11436486

.
mtr-m.5
for
11436486

.
gma-u.5
for
100798662

.
gma-u.5
for
100781353

.
ppo-u.5
for
7475431

.
ath-u.5
for
AT5G05210

.
vvi-u.5
for
100263152

.
sly-u.5
for
101246009

.
osa-u.5
for
4338593

.
zma-u.5
for
103627451

.


Ortholog ID: 7518
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT5G05210 LOC100781353 LOC100798662 LOC101246009 LOC4338593 LOC103627451 LOC103855622 LOC103850575 LOC100263152 LOC7475431 LOC11436486 LOC123137579 LOC123127693 LOC123401622 LOC107929135 LOC107943112 LOC106380847 LOC106428021 CHLRE_02g082300v5 LOC8074787 LOC102595193 LOC102612211 LOC100820931 LOC100825057 LOC107821668 LOC107828845
Function* Surfeit locus protein 6 ribosomal RNA-processing protein 14-C-like surfeit locus protein 6 ribosomal RNA-processing protein 14-C ribosomal RNA-processing protein 14-C rRNA-processing protein 14 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 uncharacterized LOC100263152 uncharacterized LOC7475431 surfeit locus protein 6 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14 surfeit locus protein 6 homolog ribosomal RNA-processing protein 14 ribosomal RNA-processing protein 14-like ribosomal RNA-processing protein 14 uncharacterized protein surfeit locus protein 6 homolog ribosomal RNA-processing protein 14-C-like uncharacterized LOC102612211 ribosomal RNA-processing protein 14-C ribosomal RNA-processing protein 14-C uncharacterized LOC107821668 uncharacterized LOC107828845
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830403 100781353 100798662 101246009 4338593 103627451 103855622 103850575 100263152 7475431 11436486 123137579 123127693 123401622 107929135 107943112 106380847 106428021 5727325 8074787 102595193 102612211 100820931 100825057 107821668 107828845
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