ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8075852	MADS-box transcription factor 26
sbi-r.1	8066077	MADS-box transcription factor 26
zma-u.5	100282492	MADS-box transcription factor 26
zma-u.5	103628959	MADS-box transcription factor 26
osa-u.5	4344493	MADS-box transcription factor 26-like
tae-r.2	123045555	MADS-box transcription factor 26-like
tae-r.2	123053398	MADS-box transcription factor 26
tae-r.2	123189307	MADS-box transcription factor 26
hvu-r.1	123409312	MADS-box transcription factor 26
hvu-r.1	123426807	MADS-box transcription factor 26-like
bdi-r.1	100829055	MADS-box transcription factor 26-like
bdi-r.1	100835552	MADS-box transcription factor 26-like
ath-u.5	AGL12	AGAMOUS-like 12
gma-u.5	100783345	agamous-like MADS-box protein AGL12-like protein
gma-u.5	100815314	agamous-like MADS-box protein AGL12
sly-u.5	544256	TAGL12 transcription factor
bra-r.6	103831676	agamous-like MADS-box protein AGL12
bra-r.6	103852713	agamous-like MADS-box protein AGL12
bra-r.6	103830841	agamous-like MADS-box protein AGL12
mtr-u.5	25491856	agamous-like MADS-box protein AGL12
ghi-r.1	107919016	agamous-like MADS-box protein AGL12
ghi-r.1	107952051	agamous-like MADS-box protein AGL12
bna-r.1	106414354	agamous-like MADS-box protein AGL12
bna-r.1	106397842	agamous-like MADS-box protein AGL12
bna-r.1	106381088	agamous-like MADS-box protein AGL12
sot-r.1	102599417	agamous-like MADS-box protein AGL12
nta-r.1	107772110	agamous-like MADS-box protein AGL12
nta-r.1	107832036	agamous-like MADS-box protein AGL12

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(109 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2977 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(203 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(251 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(479 genes)	IEA

Protein

XP_021319583.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, mito 1, chlo 1, plas 1, cyto_mito 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_021319583.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_021319583.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8075852	sbi-r.1 for 8066077	zma-u.5 for 100282492	zma-u.5 for 103628959	osa-u.5 for 4344493	tae-r.2 for 123045555	tae-r.2 for 123053398	tae-r.2 for 123189307	hvu-r.1 for 123409312	hvu-r.1 for 123426807	bdi-r.1 for 100829055	bdi-r.1 for 100835552	ath-u.5 for AGL12	gma-u.5 for 100783345	gma-u.5 for 100815314	sly-u.5 for 544256	bra-r.6 for 103831676	bra-r.6 for 103852713	bra-r.6 for 103830841	mtr-u.5 for 25491856	ghi-r.1 for 107919016	ghi-r.1 for 107952051	bna-r.1 for 106414354	bna-r.1 for 106397842	bna-r.1 for 106381088	sot-r.1 for 102599417	nta-r.1 for 107772110	nta-r.1 for 107832036

Ortholog

Ortholog ID: 4158

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

mtr

ghi

bna

sot

nta

Symbol

AGL12

Function^*

MADS-box transcription factor 26

MADS-box transcription factor 26-like

MADS-box transcription factor 26

MADS-box transcription factor 26-like

AGAMOUS-like 12

agamous-like MADS-box protein AGL12-like protein

agamous-like MADS-box protein AGL12

TAGL12 transcription factor

agamous-like MADS-box protein AGL12

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00592	alpha-Linolenic acid metabolism	6
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
tae01230	Biosynthesis of amino acids	2
tae00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	3
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00750	Vitamin B6 metabolism	3
gma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8075852

8066077

100282492

103628959

4344493

123189307

100136962

123409312

123426807

100829055

843497

100783345

100815314

544256

103831676

103852713

103830841

25491856

107919016

107952051

106414354

106381088

106345490

102599417

107772110

107832036

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8075852 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8075852 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	mtr	ghi	bna	sot	nta	ppo	vvi	cit	cre
Paralog	2	2	1	3	2	2	1	2	1	3	1	2	3	1	2	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8075852 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8075852 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**