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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078323   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sbi-r.1   8071280   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sbi-r.1   8072837   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 zma-u.5   100217208   uncharacterized LOC100217208 
 osa-u.5   4337724   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 tae-r.2   123180332   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 tae-r.2   123190252   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 tae-r.2   123110627   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 hvu-r.1   123420418   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 bdi-r.1   100844572   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ath-u.5   AT5G26760   RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein 
 gma-u.5   100804112   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 gma-u.5   100800951   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sly-u.5   101260378   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 bra-r.6   103854695   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 vvi-u.5   100258021   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ppo-u.5   7475177   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 mtr-u.5   25483637   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ghi-r.1   107909283   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ghi-r.1   107886784   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 bna-r.1   106382546   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 bna-r.1   106354996   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 bna-r.1   106348712   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sot-r.1   102590034   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 cit-r.1   102631165   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 nta-r.1   107826173   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 nta-r.1   107793617   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 cre-r.1   CHLRE_12g532700v5   uncharacterized protein 

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Top 50 coexpressed genes to 8078323 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078323 (sbi-r.1 coexpression data)

CoexMap"8078323"


sbiLOC8078323 | Entrez gene ID : 8078323    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 1 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (12 genes)  IEA  
GO:0043175 [list] [network] RNA polymerase core enzyme binding  (24 genes)  IEA  
Protein XP_002453603.1 [sequence] [blastp]
XP_021314063.1 [sequence] [blastp]
XP_021314064.1 [sequence] [blastp]
XP_021314065.1 [sequence] [blastp]
XP_021314066.1 [sequence] [blastp]
XP_021314067.1 [sequence] [blastp]
XP_021314068.1 [sequence] [blastp]
XP_021314069.1 [sequence] [blastp]
XP_021314070.1 [sequence] [blastp]
XP_021314071.1 [sequence] [blastp]
XP_021314072.1 [sequence] [blastp]
XP_021314073.1 [sequence] [blastp]
XP_021314074.1 [sequence] [blastp]
XP_021314076.1 [sequence] [blastp]
XP_021314077.1 [sequence] [blastp]
XP_021314078.1 [sequence] [blastp]
XP_021314079.1 [sequence] [blastp]
XP_021314080.1 [sequence] [blastp]
XP_021314081.1 [sequence] [blastp]
XP_021314082.1 [sequence] [blastp]
XP_021314083.1 [sequence] [blastp]
XP_021314084.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002453603.1)
chlo 7,  mito 2  (predict for XP_021314063.1)
chlo 7,  mito 2  (predict for XP_021314064.1)
chlo 7,  mito 2  (predict for XP_021314065.1)
chlo 7,  mito 2  (predict for XP_021314066.1)
chlo 7,  mito 2  (predict for XP_021314067.1)
chlo 7,  mito 2  (predict for XP_021314068.1)
chlo 7,  mito 2  (predict for XP_021314069.1)
chlo 7,  mito 2  (predict for XP_021314070.1)
chlo 7,  mito 2  (predict for XP_021314071.1)
chlo 7,  mito 2  (predict for XP_021314072.1)
chlo 7,  mito 2  (predict for XP_021314073.1)
chlo 7,  mito 2  (predict for XP_021314074.1)
chlo 7,  mito 2  (predict for XP_021314076.1)
chlo 7,  mito 2  (predict for XP_021314077.1)
chlo 7,  mito 2  (predict for XP_021314078.1)
chlo 7,  mito 2  (predict for XP_021314079.1)
chlo 7,  mito 2  (predict for XP_021314080.1)
chlo 7,  mito 2  (predict for XP_021314081.1)
chlo 7,  mito 2  (predict for XP_021314082.1)
chlo 7,  mito 2  (predict for XP_021314083.1)
chlo 7,  mito 2  (predict for XP_021314084.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002453603.1)
chlo 4  (predict for XP_021314063.1)
chlo 4  (predict for XP_021314064.1)
chlo 4  (predict for XP_021314065.1)
chlo 4  (predict for XP_021314066.1)
chlo 4  (predict for XP_021314067.1)
chlo 4  (predict for XP_021314068.1)
chlo 4  (predict for XP_021314069.1)
chlo 4  (predict for XP_021314070.1)
chlo 4  (predict for XP_021314071.1)
chlo 4  (predict for XP_021314072.1)
chlo 4  (predict for XP_021314073.1)
chlo 4  (predict for XP_021314074.1)
chlo 4  (predict for XP_021314076.1)
chlo 4  (predict for XP_021314077.1)
chlo 4  (predict for XP_021314078.1)
chlo 4  (predict for XP_021314079.1)
chlo 4  (predict for XP_021314080.1)
chlo 4  (predict for XP_021314081.1)
chlo 4  (predict for XP_021314082.1)
chlo 4  (predict for XP_021314083.1)
chlo 4  (predict for XP_021314084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078323
sbi-r.1
for
8071280
sbi-r.1
for
8072837
zma-u.5
for
100217208
osa-u.5
for
4337724
tae-r.2
for
123180332
tae-r.2
for
123190252
tae-r.2
for
123110627
hvu-r.1
for
123420418
bdi-r.1
for
100844572
ath-u.5
for
AT5G26760
gma-u.5
for
100804112
gma-u.5
for
100800951
sly-u.5
for
101260378
bra-r.6
for
103854695
vvi-u.5
for
100258021
ppo-u.5
for
7475177
mtr-u.5
for
25483637
ghi-r.1
for
107909283
ghi-r.1
for
107886784
bna-r.1
for
106382546
bna-r.1
for
106354996
bna-r.1
for
106348712
sot-r.1
for
102590034
cit-r.1
for
102631165
nta-r.1
for
107826173
nta-r.1
for
107793617
cre-r.1
for
CHLRE_12g532700v5


Ortholog ID: 8165
Species sbi sbi sbi zma osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC8078323 LOC8071280 LOC8072837 LOC100217208 LOC4337724 LOC123180332 LOC123190252 LOC123110627 LOC123420418 LOC100844572 AT5G26760 LOC100804112 LOC100800951 LOC101260378 LOC103854695 LOC100258021 LOC7475177 LOC25483637 LOC107909283 LOC107886784 LOC106354996 LOC106348712 LOC125580871 LOC102590034 LOC102631165 LOC107826173 LOC107793617 CHLRE_12g532700v5
Function* putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized LOC100217208 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 3
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8078323 8071280 8072837 100217208 4337724 123180332 123190252 123110627 123420418 100844572 832734 100804112 100800951 101260378 103854695 100258021 7475177 25483637 107909283 107886784 106354996 106348712 125580871 102590034 102631165 107826173 107793617 5718548
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