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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8071280   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 zma-u.5   100217208   uncharacterized LOC100217208 
 osa-u.5   4337724   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ath-u.5   AT5G26760   RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein 
 gma-u.5   100804112   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 gma-u.5   100800951   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sly-u.5   101260378   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 vvi-u.5   100258021   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ppo-u.5   7475177   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 mtr-u.5   25483637   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 

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Top 50 coexpressed genes to 8071280 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8071280 (sbi-r.1 coexpression data)

CoexMap"8071280"


sbiLOC8071280 | Entrez gene ID : 8071280    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (12 genes)  IEA  
GO:0043175 [list] [network] RNA polymerase core enzyme binding  (24 genes)  IEA  
Protein XP_002440538.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  cysk 1  (predict for XP_002440538.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_002440538.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8071280

.
zma-u.5
for
100217208

.
osa-u.5
for
4337724

.
ath-u.5
for
AT5G26760

.
gma-u.5
for
100804112

.
gma-u.5
for
100800951

.
sly-u.5
for
101260378

.
vvi-u.5
for
100258021

.
ppo-u.5
for
7475177

.
mtr-u.5
for
25483637

.


Ortholog ID: 8165
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT5G26760 LOC100804112 LOC100800951 LOC101260378 LOC4337724 LOC100217208 LOC103854695 LOC100258021 LOC7475177 LOC25483637 LOC123180332 LOC123110627 LOC123420418 LOC107909283 LOC107886784 LOC106354996 LOC125580871 CHLRE_12g532700v5 LOC8071280 LOC8072837 LOC102590034 LOC102631165 LOC100844572 LOC107793617 LOC107826173
Function* RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized LOC100217208 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized protein putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 3
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832734 100804112 100800951 101260378 4337724 100217208 103854695 100258021 7475177 25483637 123180332 123110627 123420418 107909283 107886784 106354996 125580871 5718548 8071280 8072837 102590034 102631165 100844572 107793617 107826173
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