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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102590034   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 sly-u.5   101260378   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ath-u.5   AT5G26760   RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein 
 gma-u.5   100804112   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 gma-u.5   100800951   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 vvi-u.5   100258021   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 ppo-u.5   7475177   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 mtr-u.5   25483637   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 osa-u.5   4337724   putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog 
 zma-u.5   100217208   uncharacterized LOC100217208 

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Top 50 coexpressed genes to 102590034 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102590034 (sot-r.1 coexpression data)

CoexMap"102590034"


sotLOC102590034 | Entrez gene ID : 102590034      
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (5 genes)  IEA  
GO:0043175 [list] [network] RNA polymerase core enzyme binding  (19 genes)  IEA  
Protein XP_006358558.1 [sequence] [blastp]
XP_015169443.1 [sequence] [blastp]
XP_015169444.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_006358558.1)
nucl 4,  cyto 1,  E.R. 1,  cyto_E.R. 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  golg 1,  chlo_mito 1,  golg_plas 1,  cyto_pero 1,  mito_plas 1  (predict for XP_015169443.1)
nucl 4,  cyto 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_015169444.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for XP_006358558.1)
other 6,  scret 4  (predict for XP_015169443.1)
other 6,  scret 4  (predict for XP_015169444.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102590034
sly-u.5
for
101260378
ath-u.5
for
AT5G26760
gma-u.5
for
100804112
gma-u.5
for
100800951
vvi-u.5
for
100258021
ppo-u.5
for
7475177
mtr-u.5
for
25483637
osa-u.5
for
4337724
zma-u.5
for
100217208


Ortholog ID: 8165
Species sot sly nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC102590034 LOC101260378 LOC107793617 LOC107826173 AT5G26760 LOC100804112 LOC100800951 LOC103854695 LOC100258021 LOC7475177 LOC25483637 LOC107909283 LOC107886784 LOC106354996 LOC125580871 LOC102631165 LOC4337724 LOC100217208 LOC123180332 LOC123110627 LOC123420418 LOC8071280 LOC8072837 LOC100844572 CHLRE_12g532700v5
Function* putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized LOC100217208 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 3
ghi03013 Nucleocytoplasmic transport 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102590034 101260378 107793617 107826173 832734 100804112 100800951 103854695 100258021 7475177 25483637 107909283 107886784 106354996 125580871 102631165 4337724 100217208 123180332 123110627 123420418 8071280 8072837 100844572 5718548
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