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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079817   60S ribosomal protein L13-2 
 sbi-r.1   8064692   60S ribosomal protein L13-2 
 sbi-r.1   8080961   60S ribosomal protein L13-2 
 zma-u.5   100282254   60S ribosomal protein L13-2 
 zma-u.5   100286371   60S ribosomal protein L13 
 zma-u.5   100273645   60S ribosomal protein L13 
 osa-u.5   4339923   60S ribosomal protein L13-1 
 osa-u.5   4333306   large ribosomal subunit protein eL13y 
 tae-r.2   123131777   60S ribosomal protein L13-1 
 tae-r.2   123135654   60S ribosomal protein L13-1 
 tae-r.2   123165450   60S ribosomal protein L13-1 
 hvu-r.1   123401771   60S ribosomal protein L13-1-like 
 hvu-r.1   123407934   60S ribosomal protein L13-1-like 
 bdi-r.1   100830340   60S ribosomal protein L13-1 
 bdi-r.1   100825017   60S ribosomal protein L13-1 
 ath-u.5   BBC1   breast basic conserved 1 
 ath-u.5   AT5G23900   Ribosomal protein L13e family protein 
 gma-u.5   100805957   60S ribosomal protein L13-1 
 gma-u.5   100305489   60S ribosomal protein L13-1 
 gma-u.5   100499935   60S ribosomal protein L13 
 sly-u.5   101262297   large ribosomal subunit protein eL13z 
 sly-u.5   101264241   large ribosomal subunit protein eL13z 
 bra-r.6   103874976   60S ribosomal protein L13-1 
 bra-r.6   103873508   60S ribosomal protein L13-2 
 bra-r.6   103873096   60S ribosomal protein L13-1 
 vvi-u.5   100257471   large ribosomal subunit protein eL13z 
 vvi-u.5   100246745   large ribosomal subunit protein eL13z 
 ppo-u.5   7467594   60S ribosomal protein L13-1 
 ppo-u.5   7491903   60S ribosomal protein L13-1 
 ppo-u.5   7473881   60S ribosomal protein L13-1 
 mtr-u.5   11426640   60S ribosomal protein L13-1 
 mtr-u.5   11410980   60S ribosomal protein L13-1 
 mtr-u.5   25482128   60S ribosomal protein L13-1 
 ghi-r.1   107912654   60S ribosomal protein L13-1 
 ghi-r.1   107915465   60S ribosomal protein L13-1 
 ghi-r.1   107937314   60S ribosomal protein L13-1-like 
 bna-r.1   106366033   60S ribosomal protein L13-3-like 
 bna-r.1   111197723   60S ribosomal protein L13-2-like 
 bna-r.1   106387836   60S ribosomal protein L13-2 
 sot-r.1   102589955   60S ribosomal protein L13-1-like 
 sot-r.1   102591658   60S ribosomal protein L13-1-like 
 sot-r.1   RPL13   ribosomal protein L13 
 cit-r.1   102614464   60S ribosomal protein L13-1 
 cit-r.1   102613171   60S ribosomal protein L13-1 
 nta-r.1   107764897   60S ribosomal protein L13-1-like 
 nta-r.1   107766512   large ribosomal subunit protein eL13z 
 nta-r.1   107770287   large ribosomal subunit protein eL13y-like 
 cre-r.1   CHLRE_14g630100v5   ribosomal protein L13 

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Top 50 coexpressed genes to 8079817 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079817 (sbi-r.1 coexpression data)

CoexMap"8079817"


sbiLOC8079817 | Entrez gene ID : 8079817    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 3 2 2 2 3 2 3 2 3 3 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002456870.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_002456870.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002456870.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079817
sbi-r.1
for
8064692
sbi-r.1
for
8080961
zma-u.5
for
100282254
zma-u.5
for
100286371
zma-u.5
for
100273645
osa-u.5
for
4339923
osa-u.5
for
4333306
tae-r.2
for
123131777
tae-r.2
for
123135654
tae-r.2
for
123165450
hvu-r.1
for
123401771
hvu-r.1
for
123407934
bdi-r.1
for
100830340
bdi-r.1
for
100825017
ath-u.5
for
BBC1
ath-u.5
for
AT5G23900
gma-u.5
for
100805957
gma-u.5
for
100305489
gma-u.5
for
100499935
sly-u.5
for
101262297
sly-u.5
for
101264241
bra-r.6
for
103874976
bra-r.6
for
103873508
bra-r.6
for
103873096
vvi-u.5
for
100257471
vvi-u.5
for
100246745
ppo-u.5
for
7467594
ppo-u.5
for
7491903
ppo-u.5
for
7473881
mtr-u.5
for
11426640
mtr-u.5
for
11410980
mtr-u.5
for
25482128
ghi-r.1
for
107912654
ghi-r.1
for
107915465
ghi-r.1
for
107937314
bna-r.1
for
106366033
bna-r.1
for
111197723
bna-r.1
for
106387836
sot-r.1
for
102589955
sot-r.1
for
102591658
sot-r.1
for
RPL13
cit-r.1
for
102614464
cit-r.1
for
102613171
nta-r.1
for
107764897
nta-r.1
for
107766512
nta-r.1
for
107770287
cre-r.1
for
CHLRE_14g630100v5


Ortholog ID: 1982
Species sbi sbi sbi zma zma zma osa osa tae tae tae hvu hvu bdi bdi ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC8079817 LOC8064692 LOC8080961 LOC100282254 LOC100286371 LOC100273645 LOC4339923 LOC4333306 LOC123131777 LOC123165450 LOC123162399 LOC123401771 LOC123407934 LOC100830340 LOC100825017 BBC1 AT5G23900 LOC100805957 LOC100305489 LOC100499935 LOC101262297 LOC101264241 LOC103874976 LOC103873096 LOC103865696 LOC100257471 LOC100246745 LOC7467594 LOC7491903 LOC7473881 LOC11426640 LOC11410980 LOC25482128 LOC107937314 LOC107954756 LOC121232132 LOC111197723 LOC106365518 LOC106366026 LOC102589955 LOC102591658 RPL13 LOC102614464 LOC102613171 LOC107764897 LOC107770287 LOC107805709 CHLRE_14g630100v5
Function* 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13 60S ribosomal protein L13 60S ribosomal protein L13-1 large ribosomal subunit protein eL13y 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1 60S ribosomal protein L13-1 breast basic conserved 1 Ribosomal protein L13e family protein 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-3 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-2-like 60S ribosomal protein L13-2-like 60S ribosomal protein L13-3-like 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1-like ribosomal protein L13 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like large ribosomal subunit protein eL13y-like large ribosomal subunit protein eL13z-like ribosomal protein L13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8079817 8064692 8080961 100282254 100286371 100273645 4339923 4333306 123131777 123165450 123162399 123401771 123407934 100830340 100825017 824062 832455 100805957 100305489 100499935 101262297 101264241 103874976 103873096 103865696 100257471 100246745 7467594 7491903 7473881 11426640 11410980 25482128 107937314 107954756 121232132 111197723 106365518 106366026 102589955 102591658 102603931 102614464 102613171 107764897 107770287 107805709 5718254
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