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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079817   60S ribosomal protein L13-2 
 zma-u.5   100282254   60S ribosomal protein L13-2 
 zma-u.5   100286371   60S ribosomal protein L13 
 zma-u.5   100273645   60S ribosomal protein L13 
 osa-u.5   4339923   60S ribosomal protein L13-1 
 osa-u.5   4333306   large ribosomal subunit protein eL13y 
 ath-u.5   BBC1   breast basic conserved 1 
 ath-u.5   AT5G23900   Ribosomal protein L13e family protein 
 gma-u.5   100805957   60S ribosomal protein L13-1 
 gma-u.5   100305489   60S ribosomal protein L13-1 
 gma-u.5   100499935   60S ribosomal protein L13 
 sly-u.5   101262297   large ribosomal subunit protein eL13z 
 sly-u.5   101264241   large ribosomal subunit protein eL13z 
 vvi-u.5   100257471   large ribosomal subunit protein eL13z 
 vvi-u.5   100246745   large ribosomal subunit protein eL13z 
 ppo-u.5   7467594   60S ribosomal protein L13-1 
 ppo-u.5   7491903   60S ribosomal protein L13-1 
 ppo-u.5   7473881   60S ribosomal protein L13-1 
 mtr-u.5   11426640   60S ribosomal protein L13-1 
 mtr-u.5   11410980   60S ribosomal protein L13-1 
 mtr-u.5   25482128   60S ribosomal protein L13-1 

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Top 50 coexpressed genes to 8079817 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079817 (sbi-r.1 coexpression data)

CoexMap"8079817"


sbiLOC8079817 | Entrez gene ID : 8079817    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002456870.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_002456870.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002456870.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079817

.
zma-u.5
for
100282254

.
zma-u.5
for
100286371

.
zma-u.5
for
100273645

.
osa-u.5
for
4339923

.
osa-u.5
for
4333306

.
ath-u.5
for
BBC1

.
ath-u.5
for
AT5G23900

.
gma-u.5
for
100805957

.
gma-u.5
for
100305489

.
gma-u.5
for
100499935

.
sly-u.5
for
101262297

.
sly-u.5
for
101264241

.
vvi-u.5
for
100257471

.
vvi-u.5
for
100246745

.
ppo-u.5
for
7467594

.
ppo-u.5
for
7491903

.
ppo-u.5
for
7473881

.
mtr-u.5
for
11426640

.
mtr-u.5
for
11410980

.
mtr-u.5
for
25482128

.


Ortholog ID: 1982
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G23900 LOC100805957 LOC100305489 LOC101264241 LOC101262297 LOC4339923 LOC4333306 LOC100282254 LOC100286371 LOC103873096 LOC103865696 LOC100257471 LOC100246745 LOC7491903 LOC7467594 LOC11410980 LOC11426640 LOC123165450 LOC123162399 LOC123401771 LOC123407934 LOC121232132 LOC107937314 LOC111197723 LOC106366026 CHLRE_14g630100v5 LOC8080961 LOC8064692 LOC102589955 RPL13 LOC102613171 LOC102614464 LOC100830340 LOC100825017 LOC107805709 LOC107764897
Function* Ribosomal protein L13e family protein 60S ribosomal protein L13-1 60S ribosomal protein L13-1 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1 large ribosomal subunit protein eL13y 60S ribosomal protein L13-2 60S ribosomal protein L13 60S ribosomal protein L13-1 60S ribosomal protein L13-3 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like 60S ribosomal protein L13-2-like 60S ribosomal protein L13-3-like ribosomal protein L13 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13-1-like ribosomal protein L13 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 large ribosomal subunit protein eL13z-like 60S ribosomal protein L13-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832455 100805957 100305489 101264241 101262297 4339923 4333306 100282254 100286371 103873096 103865696 100257471 100246745 7491903 7467594 11410980 11426640 123165450 123162399 123401771 123407934 121232132 107937314 111197723 106366026 5718254 8080961 8064692 102589955 102603931 102613171 102614464 100830340 100825017 107805709 107764897
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