ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100499935	60S ribosomal protein L13
gma-r.7	100499935	60S ribosomal protein L13
gma-m.5	100499935	60S ribosomal protein L13
gma-u.5	100305489	60S ribosomal protein L13-1
gma-u.5	100782333	60S ribosomal protein L13-1-like
gma-u.5	100805957	60S ribosomal protein L13-1
mtr-u.5	25482128	60S ribosomal protein L13-1
mtr-u.5	11426640	60S ribosomal protein L13-1
mtr-u.5	11410980	60S ribosomal protein L13-1
ppo-u.5	18094068	60S ribosomal protein L13-1
ppo-u.5	7473881	60S ribosomal protein L13-1
ppo-u.5	7467594	60S ribosomal protein L13-1
ath-u.5	BBC1	breast basic conserved 1
ath-u.5	AT5G23900	Ribosomal protein L13e family protein
vvi-u.5	100246745	large ribosomal subunit protein eL13z
vvi-u.5	100257471	large ribosomal subunit protein eL13z
sly-u.5	101262297	large ribosomal subunit protein eL13z
sly-u.5	101264241	large ribosomal subunit protein eL13z
osa-u.5	4339923	60S ribosomal protein L13-1
osa-u.5	4333306	large ribosomal subunit protein eL13y
zma-u.5	100273645	60S ribosomal protein L13
zma-u.5	100282254	60S ribosomal protein L13-2
zma-u.5	100286371	60S ribosomal protein L13

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0006412 [list] [network] translation

(852 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(230 genes)	IEA
GO:0005840 [list] [network] ribosome	(633 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(610 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA

Protein

NP_001238240.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 2, nucl 1

(predict for NP_001238240.2)

Subcellular
localization
TargetP

other 6

(predict for NP_001238240.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100499935	gma-r.7 for 100499935	gma-m.5 for 100499935	gma-u.5 for 100305489	gma-u.5 for 100782333	gma-u.5 for 100805957	mtr-u.5 for 25482128	mtr-u.5 for 11426640	mtr-u.5 for 11410980	ppo-u.5 for 18094068	ppo-u.5 for 7473881	ppo-u.5 for 7467594	ath-u.5 for BBC1	ath-u.5 for AT5G23900	vvi-u.5 for 100246745	vvi-u.5 for 100257471	sly-u.5 for 101262297	sly-u.5 for 101264241	osa-u.5 for 4339923	osa-u.5 for 4333306	zma-u.5 for 100273645	zma-u.5 for 100282254	zma-u.5 for 100286371

Ortholog

Ortholog ID: 1982

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

RPL13

Function^*

60S ribosomal protein L13-1

Ribosomal protein L13e family protein

60S ribosomal protein L13-1

60S ribosomal protein L13-3

large ribosomal subunit protein eL13z

60S ribosomal protein L13-1

60S ribosomal protein L13-1-like

60S ribosomal protein L13-2-like

60S ribosomal protein L13-3-like

60S ribosomal protein L13-1

large ribosomal subunit protein eL13z

60S ribosomal protein L13-1-like

ribosomal protein L13

large ribosomal subunit protein eL13z-like

60S ribosomal protein L13-1-like

60S ribosomal protein L13-1

large ribosomal subunit protein eL13y

60S ribosomal protein L13-2

60S ribosomal protein L13

60S ribosomal protein L13-1

60S ribosomal protein L13-1-like

60S ribosomal protein L13-2

60S ribosomal protein L13-1

ribosomal protein L13

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	12
bra00220	Arginine biosynthesis	2
bra00250	Alanine, aspartate and glutamate metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	17
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	17
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	15
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	18
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	18
cre00290	Valine, leucine and isoleucine biosynthesis	2
cre01210	2-Oxocarboxylic acid metabolism	2
cre01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

100805957

100305489

11410980

11426640

7491903

7467594

832455

103873096

103865696

100257471

100246745

121232132

107937314

111197723

106366026

102613171

102614464

101264241

101262297

102589955

102603931

107805709

107764897

4339923

4333306

100282254

100286371

123165450

123162399

123401771

123407934

8080961

8064692

100830340

100825017

5718254

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100499935 (gma-u.5 coexpression data)

Top 50 enrichment test to 100499935 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	3	3	2	2	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100499935 (gma-u.5 coexpression data)

Top 50 enrichment test to 100499935 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**