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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8083304   50S ribosomal protein L24, chloroplastic 
 zma-u.5   100273201   50S ribosomal protein L24, chloroplastic-like 
 osa-u.5   4341869   50S ribosomal protein L24, chloroplastic 
 tae-r.2   123164951   50S ribosomal protein L24, chloroplastic 
 tae-r.2   123148951   50S ribosomal protein L24, chloroplastic 
 tae-r.2   123156051   50S ribosomal protein L24, chloroplastic 
 hvu-r.1   123407735   50S ribosomal protein L24, chloroplastic 
 bdi-r.1   100821284   50S ribosomal protein L24, chloroplastic 
 ath-u.5   RPL24   Translation protein SH3-like family protein 
 gma-u.5   100306643   uncharacterized LOC100306643 
 gma-u.5   100500009   putative 50S ribosomal protein L24 
 sly-u.5   101261433   large ribosomal subunit protein uL24c 
 bra-r.6   103851950   50S ribosomal protein L24, chloroplastic 
 bra-r.6   103844915   50S ribosomal protein L24, chloroplastic 
 vvi-u.5   100250357   50S ribosomal protein L24, chloroplastic-like 
 ppo-u.5   18095878   50S ribosomal protein L24, chloroplastic 
 mtr-u.5   11407117   50S ribosomal protein L24, chloroplastic 
 ghi-r.1   107917786   50S ribosomal protein L24, chloroplastic 
 ghi-r.1   107942266   50S ribosomal protein L24, chloroplastic 
 bna-r.1   106441622   50S ribosomal protein L24, chloroplastic-like 
 bna-r.1   106423179   50S ribosomal protein L24, chloroplastic 
 bna-r.1   106390090   50S ribosomal protein L24, chloroplastic-like 
 sot-r.1   102605576   50S ribosomal protein L24, chloroplastic 
 sot-r.1   102582481   50S ribosomal protein L24, chloroplastic-like 
 cit-r.1   102608232   50S ribosomal protein L24, chloroplastic 
 nta-r.1   107800556   large ribosomal subunit protein uL24c-like 
 nta-r.1   107771799   large ribosomal subunit protein uL24c-like 
 nta-r.1   107770861   large ribosomal subunit protein uL24c-like 
 cre-r.1   CHLRE_16g652550v5   uncharacterized protein 

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Top 50 coexpressed genes to 8083304 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083304 (sbi-r.1 coexpression data)

CoexMap"8083304"


sbiLOC8083304 | Entrez gene ID : 8083304      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 2 1 1 1 2 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002438874.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002438874.1)
Subcellular
localization
TargetP
chlo 8,  scret 3  (predict for XP_002438874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8083304
zma-u.5
for
100273201
osa-u.5
for
4341869
tae-r.2
for
123164951
tae-r.2
for
123148951
tae-r.2
for
123156051
hvu-r.1
for
123407735
bdi-r.1
for
100821284
ath-u.5
for
RPL24
gma-u.5
for
100306643
gma-u.5
for
100500009
sly-u.5
for
101261433
bra-r.6
for
103851950
bra-r.6
for
103844915
vvi-u.5
for
100250357
ppo-u.5
for
18095878
mtr-u.5
for
11407117
ghi-r.1
for
107917786
ghi-r.1
for
107942266
bna-r.1
for
106441622
bna-r.1
for
106423179
bna-r.1
for
106390090
sot-r.1
for
102605576
sot-r.1
for
102582481
cit-r.1
for
102608232
nta-r.1
for
107800556
nta-r.1
for
107771799
nta-r.1
for
107770861
cre-r.1
for
CHLRE_16g652550v5


Ortholog ID: 6376
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC8083304 LOC100273201 LOC4341869 LOC123164951 LOC123148951 LOC123156051 LOC123407735 LOC100821284 RPL24 LOC100306643 LOC100500009 LOC101261433 LOC103851950 LOC103844915 LOC100250357 LOC18095878 LOC11407117 LOC107917786 LOC107942266 LOC106423179 LOC106390090 LOC125592876 LOC102605576 LOC102582481 LOC102608232 LOC107800556 LOC107771799 LOC107762137 CHLRE_16g652550v5
Function* 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic Translation protein SH3-like family protein uncharacterized LOC100306643 putative 50S ribosomal protein L24 large ribosomal subunit protein uL24c 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c-like large ribosomal subunit protein uL24c-like 50S ribosomal protein L24, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03060 Protein export 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8083304 100273201 4341869 123164951 123148951 123156051 123407735 100821284 835549 100306643 100500009 101261433 103851950 103844915 100250357 18095878 11407117 107917786 107942266 106423179 106390090 125592876 102605576 102582481 102608232 107800556 107771799 107762137 5723779
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