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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100500009  putative 50S ribosomal protein L24 
 gma-r.7  100500009  putative 50S ribosomal protein L24 
 gma-m.5  100500009  putative 50S ribosomal protein L24 
 gma-u.5  100306643  uncharacterized LOC100306643 
 mtr-u.5  11407117  50S ribosomal protein L24, chloroplastic 
 ppo-u.5  18095878  50S ribosomal protein L24, chloroplastic 
 ath-u.5  RPL24  Translation protein SH3-like family protein 
 bra-r.6  103851950  50S ribosomal protein L24, chloroplastic 
 bra-r.6  103844915  50S ribosomal protein L24, chloroplastic 
 vvi-u.5  100250357  50S ribosomal protein L24, chloroplastic-like 
 ghi-r.1  107942266  50S ribosomal protein L24, chloroplastic 
 ghi-r.1  107917786  50S ribosomal protein L24, chloroplastic 
 bna-r.1  106441622  50S ribosomal protein L24, chloroplastic-like 
 bna-r.1  106423179  50S ribosomal protein L24, chloroplastic 
 bna-r.1  106390090  50S ribosomal protein L24, chloroplastic-like 
 cit-r.1  102608232  50S ribosomal protein L24, chloroplastic 
 sly-u.5  101261433  large ribosomal subunit protein uL24c 
 sot-r.1  102582481  50S ribosomal protein L24, chloroplastic-like 
 sot-r.1  102605576  50S ribosomal protein L24, chloroplastic 
 nta-r.1  107762137  50S ribosomal protein L24, chloroplastic 
 nta-r.1  107770861  large ribosomal subunit protein uL24c-like 
 nta-r.1  107800556  large ribosomal subunit protein uL24c-like 
 osa-u.5  4341869  50S ribosomal protein L24, chloroplastic 
 zma-u.5  100273201  50S ribosomal protein L24, chloroplastic-like 
 tae-r.2  123148951  50S ribosomal protein L24, chloroplastic 
 tae-r.2  123156051  50S ribosomal protein L24, chloroplastic 
 tae-r.2  123164951  50S ribosomal protein L24, chloroplastic 
 hvu-r.1  123407735  50S ribosomal protein L24, chloroplastic 
 sbi-r.1  8083304  50S ribosomal protein L24, chloroplastic 
 bdi-r.1  100821284  50S ribosomal protein L24, chloroplastic 
 cre-r.1  CHLRE_16g652550v5  uncharacterized protein 

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Top 50 coexpressed genes to 100500009 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500009 (gma-u.5 coexpression data)

CoexMap"100500009"


gmaLOC100500009 | Entrez gene ID : 100500009
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 1 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein NP_001235551.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  vacu 2,  E.R._vacu 1  (predict for NP_001235551.2)
Subcellular
localization
TargetP
chlo 8,  scret 3  (predict for NP_001235551.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100500009


gma-r.7
for
100500009


gma-m.5
for
100500009


gma-u.5
for
100306643


mtr-u.5
for
11407117


ppo-u.5
for
18095878


ath-u.5
for
RPL24


bra-r.6
for
103851950


bra-r.6
for
103844915


vvi-u.5
for
100250357


ghi-r.1
for
107942266


ghi-r.1
for
107917786


bna-r.1
for
106441622


bna-r.1
for
106423179


bna-r.1
for
106390090


cit-r.1
for
102608232


sly-u.5
for
101261433


sot-r.1
for
102582481


sot-r.1
for
102605576


nta-r.1
for
107762137


nta-r.1
for
107770861


nta-r.1
for
107800556


osa-u.5
for
4341869


zma-u.5
for
100273201


tae-r.2
for
123148951


tae-r.2
for
123156051


tae-r.2
for
123164951


hvu-r.1
for
123407735


sbi-r.1
for
8083304


bdi-r.1
for
100821284


cre-r.1
for
CHLRE_16g652550v5



Ortholog ID: 6376
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100500009 LOC100306643 LOC11407117 LOC18095878 RPL24 LOC103851950 LOC103844915 LOC100250357 LOC107942266 LOC107917786 LOC106423179 LOC106390090 LOC125592876 LOC102608232 LOC101261433 LOC102582481 LOC102605576 LOC107762137 LOC107800556 LOC107771799 LOC4341869 LOC100273201 LOC123148951 LOC123156051 LOC123164951 LOC123407735 LOC8083304 LOC100821284 CHLRE_16g652550v5
Function* putative 50S ribosomal protein L24 uncharacterized LOC100306643 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic Translation protein SH3-like family protein 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c-like large ribosomal subunit protein uL24c-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03060 Protein export 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100500009 100306643 11407117 18095878 835549 103851950 103844915 100250357 107942266 107917786 106423179 106390090 125592876 102608232 101261433 102582481 102605576 107762137 107800556 107771799 4341869 100273201 123148951 123156051 123164951 123407735 8083304 100821284 5723779
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