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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8083304   50S ribosomal protein L24, chloroplastic 
 zma-u.5   100273201   50S ribosomal protein L24, chloroplastic-like 
 osa-u.5   4341869   50S ribosomal protein L24, chloroplastic 
 ath-u.5   RPL24   Translation protein SH3-like family protein 
 gma-u.5   100306643   uncharacterized LOC100306643 
 gma-u.5   100500009   putative 50S ribosomal protein L24 
 sly-u.5   101261433   large ribosomal subunit protein uL24c 
 vvi-u.5   100250357   50S ribosomal protein L24, chloroplastic-like 
 ppo-u.5   18095878   50S ribosomal protein L24, chloroplastic 
 mtr-u.5   11407117   50S ribosomal protein L24, chloroplastic 

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Top 50 coexpressed genes to 8083304 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083304 (sbi-r.1 coexpression data)

CoexMap"8083304"


sbiLOC8083304 | Entrez gene ID : 8083304      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002438874.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002438874.1)
Subcellular
localization
TargetP
chlo 8,  scret 3  (predict for XP_002438874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8083304

.
zma-u.5
for
100273201

.
osa-u.5
for
4341869

.
ath-u.5
for
RPL24

.
gma-u.5
for
100306643

.
gma-u.5
for
100500009

.
sly-u.5
for
101261433

.
vvi-u.5
for
100250357

.
ppo-u.5
for
18095878

.
mtr-u.5
for
11407117

.


Ortholog ID: 6376
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol RPL24 LOC100500009 LOC100306643 LOC101261433 LOC4341869 LOC100273201 LOC103844915 LOC100250357 LOC18095878 LOC11407117 LOC123164951 LOC123156051 LOC123407735 LOC107942266 LOC107917786 LOC125592876 LOC106390090 CHLRE_16g652550v5 LOC8083304 LOC102605576 LOC102582481 LOC102608232 LOC100821284 LOC107771799 LOC107762137
Function* Translation protein SH3-like family protein putative 50S ribosomal protein L24 uncharacterized LOC100306643 large ribosomal subunit protein uL24c 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic-like uncharacterized protein 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c-like 50S ribosomal protein L24, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835549 100500009 100306643 101261433 4341869 100273201 103844915 100250357 18095878 11407117 123164951 123156051 123407735 107942266 107917786 125592876 106390090 5723779 8083304 102605576 102582481 102608232 100821284 107771799 107762137
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