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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084530   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   103654662   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   100502245   Polyadenylate-binding protein-interacting protein 3 
 osa-u.5   4329365   polyadenylate-binding protein-interacting protein 4 
 tae-r.2   123129293   polyadenylate-binding protein-interacting protein 3-like 
 tae-r.2   123129971   polyadenylate-binding protein-interacting protein 3-like 
 tae-r.2   123131655   polyadenylate-binding protein-interacting protein 4 
 hvu-r.1   123401219   polyadenylate-binding protein-interacting protein 4-like 
 bdi-r.1   100820969   polyadenylate-binding protein-interacting protein 4 
 ath-u.5   CID4   CTC-interacting domain 4 
 ath-u.5   CID3   CTC-interacting domain 3 
 gma-u.5   100782491   polyadenylate-binding protein-interacting protein 3 
 gma-u.5   100796073   polyadenylate-binding protein-interacting protein 4 
 gma-u.5   100812754   polyadenylate-binding protein-interacting protein 3 
 sly-u.5   101259622   polyadenylate-binding protein-interacting protein 4 
 sly-u.5   101261127   polyadenylate-binding protein-interacting protein 4 
 bra-r.6   103871067   polyadenylate-binding protein-interacting protein 3 
 bra-r.6   103842374   polyadenylate-binding protein-interacting protein 4 
 vvi-u.5   100265239   polyadenylate-binding protein-interacting protein 4 
 ppo-u.5   7478112   polyadenylate-binding protein-interacting protein 3 
 ppo-u.5   7478359   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   25500533   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   11435252   polyadenylate-binding protein-interacting protein 3 
 ghi-r.1   121230838   polyadenylate-binding protein-interacting protein 3 
 ghi-r.1   107960300   polyadenylate-binding protein-interacting protein 3 
 ghi-r.1   107931600   polyadenylate-binding protein-interacting protein 3 
 bna-r.1   106431645   polyadenylate-binding protein-interacting protein 3-like 
 bna-r.1   106345832   polyadenylate-binding protein-interacting protein 3 
 sot-r.1   102592714   polyadenylate-binding protein-interacting protein 4-like 
 sot-r.1   102606381   polyadenylate-binding protein-interacting protein 4-like 
 cit-r.1   102610113   polyadenylate-binding protein-interacting protein 3 
 nta-r.1   107785908   polyadenylate-binding protein-interacting protein 4 
 nta-r.1   107799444   polyadenylate-binding protein-interacting protein 4-like 
 nta-r.1   107813901   polyadenylate-binding protein-interacting protein 4 
 cre-r.1   CHLRE_01g063997v5   uncharacterized protein 

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Top 50 coexpressed genes to 8084530 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084530 (sbi-r.1 coexpression data)

CoexMap"8084530"


sbiLOC8084530 | Entrez gene ID : 8084530    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 3 1 1 2 3 2 2 1 2 2 3 2 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (7 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (10 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021315199.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_021315199.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021315199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084530
zma-u.5
for
103654662
zma-u.5
for
100502245
osa-u.5
for
4329365
tae-r.2
for
123129293
tae-r.2
for
123129971
tae-r.2
for
123131655
hvu-r.1
for
123401219
bdi-r.1
for
100820969
ath-u.5
for
CID4
ath-u.5
for
CID3
gma-u.5
for
100782491
gma-u.5
for
100796073
gma-u.5
for
100812754
sly-u.5
for
101259622
sly-u.5
for
101261127
bra-r.6
for
103871067
bra-r.6
for
103842374
vvi-u.5
for
100265239
ppo-u.5
for
7478112
ppo-u.5
for
7478359
mtr-u.5
for
25500533
mtr-u.5
for
11435252
ghi-r.1
for
121230838
ghi-r.1
for
107960300
ghi-r.1
for
107931600
bna-r.1
for
106431645
bna-r.1
for
106345832
sot-r.1
for
102592714
sot-r.1
for
102606381
cit-r.1
for
102610113
nta-r.1
for
107785908
nta-r.1
for
107799444
nta-r.1
for
107813901
cre-r.1
for
CHLRE_01g063997v5


Ortholog ID: 3801
Species sbi zma zma osa tae tae tae hvu bdi ath ath gma gma gma sly sly bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC8084530 LOC103654662 LOC100502245 LOC4329365 LOC123129971 LOC123131655 LOC123143038 LOC123401219 LOC100820969 CID4 CID3 LOC100782491 LOC100796073 LOC100778053 LOC101259622 LOC101261127 LOC103871067 LOC103842374 LOC100265239 LOC7478112 LOC7478359 LOC25500533 LOC11435252 LOC107931600 LOC107904324 LOC107914026 LOC106348628 LOC125609479 LOC102592714 LOC102606381 LOC102610113 LOC107785908 LOC107799444 LOC107813901 CHLRE_01g063997v5
Function* polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 Polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4 CTC-interacting domain 4 CTC-interacting domain 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03022 Basal transcription factors 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8084530 103654662 100502245 4329365 123129971 123131655 123143038 123401219 100820969 820615 841857 100782491 100796073 100778053 101259622 101261127 103871067 103842374 100265239 7478112 7478359 25500533 11435252 107931600 107904324 107914026 106348628 125609479 102592714 102606381 102610113 107785908 107799444 107813901 66052209
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