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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084530   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   103654662   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   100502245   Polyadenylate-binding protein-interacting protein 3 
 osa-u.5   4329365   polyadenylate-binding protein-interacting protein 4 
 ath-u.5   CID4   CTC-interacting domain 4 
 ath-u.5   CID3   CTC-interacting domain 3 
 gma-u.5   100782491   polyadenylate-binding protein-interacting protein 3 
 gma-u.5   100796073   polyadenylate-binding protein-interacting protein 4 
 gma-u.5   100812754   polyadenylate-binding protein-interacting protein 3 
 sly-u.5   101259622   polyadenylate-binding protein-interacting protein 4 
 sly-u.5   101261127   polyadenylate-binding protein-interacting protein 4 
 vvi-u.5   100265239   polyadenylate-binding protein-interacting protein 4 
 ppo-u.5   7478112   polyadenylate-binding protein-interacting protein 3 
 ppo-u.5   7478359   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   25500533   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   11435252   polyadenylate-binding protein-interacting protein 3 

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Top 50 coexpressed genes to 8084530 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084530 (sbi-r.1 coexpression data)

CoexMap"8084530"


sbiLOC8084530 | Entrez gene ID : 8084530    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (7 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (10 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021315199.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_021315199.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021315199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084530

.
zma-u.5
for
103654662

.
zma-u.5
for
100502245

.
osa-u.5
for
4329365

.
ath-u.5
for
CID4

.
ath-u.5
for
CID3

.
gma-u.5
for
100782491

.
gma-u.5
for
100796073

.
gma-u.5
for
100812754

.
sly-u.5
for
101259622

.
sly-u.5
for
101261127

.
vvi-u.5
for
100265239

.
ppo-u.5
for
7478112

.
ppo-u.5
for
7478359

.
mtr-u.5
for
25500533

.
mtr-u.5
for
11435252

.


Ortholog ID: 3801
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol CID3 CID4 LOC100778053 LOC100782491 LOC101261127 LOC101259622 LOC4329365 LOC103654662 LOC100502245 LOC103842374 LOC103871067 LOC100265239 LOC7478359 LOC7478112 LOC25500533 LOC11435252 LOC123131655 LOC123129971 LOC123401219 LOC107914026 LOC107904324 LOC125609479 CHLRE_01g063997v5 LOC8084530 LOC102606381 LOC102592714 LOC102610113 LOC100820969 LOC107813901 LOC107799444
Function* CTC-interacting domain 3 CTC-interacting domain 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 Polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like uncharacterized protein polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03022 Basal transcription factors 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841857 820615 100778053 100782491 101261127 101259622 4329365 103654662 100502245 103842374 103871067 100265239 7478359 7478112 25500533 11435252 123131655 123129971 123401219 107914026 107904324 125609479 66052209 8084530 102606381 102592714 102610113 100820969 107813901 107799444
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