ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102579447	POC1 centriolar protein homolog A-like
sot-r.1	102585613	U4/U6 small nuclear ribonucleoprotein Prp4
sot-r.1	102596826	WD repeat-containing protein 44-like
sly-u.5	101256031	uncharacterized LOC101256031
sly-u.5	101260733	uncharacterized WD repeat-containing protein C18H10.05
sly-u.5	101249662	uncharacterized LOC101249662
nta-r.1	107766553	uncharacterized LOC107766553
nta-r.1	107769711	uncharacterized LOC107769711
ath-u.5	AT2G37670	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G64610	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G48870	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100782200	WD repeat-containing protein 44
gma-u.5	100780979	periodic tryptophan protein 2 homolog
bra-r.6	103838192	WD repeat-containing protein 44
bra-r.6	103844825	WD repeat-containing protein 44
bra-r.6	103844882	WD repeat-containing protein 44
vvi-u.5	100264190	uncharacterized LOC100264190
vvi-u.5	100245187	WD repeat-containing protein YMR102C
vvi-u.5	100249640	uncharacterized LOC100249640
ppo-u.5	7467055	vegetative incompatibility protein HET-E-1
ppo-u.5	7497266	uncharacterized LOC7497266
mtr-u.5	11435030	2-deoxy-glucose resistant protein 2
mtr-u.5	11408556	uncharacterized LOC11408556
mtr-u.5	25502243	uncharacterized WD repeat-containing protein alr3466
ghi-r.1	107924375	WD repeat-containing protein 44
ghi-r.1	107929490	uncharacterized WD repeat-containing protein C18H10.05
ghi-r.1	107924161	WD repeat-containing protein 44
bna-r.1	125576587	uncharacterized LOC125576587
bna-r.1	111200919	WD repeat-containing protein 44-like
cit-r.1	102609724	uncharacterized LOC102609724
cit-r.1	102614368	uncharacterized LOC102614368
cit-r.1	102618704	WD repeat-containing protein YMR102C-like
osa-u.5	9269146	uncharacterized LOC9269146
osa-u.5	4336699	uncharacterized LOC4336699
zma-u.5	100275689	uncharacterized LOC100275689
zma-u.5	100281552	uncharacterized LOC100281552
zma-u.5	100501308	WD repeat-containing protein 44
tae-r.2	123047412	WD repeat-containing protein 44
tae-r.2	123099072	uncharacterized LOC123099072
hvu-r.1	123449932	uncharacterized LOC123449932
hvu-r.1	123428340	WD repeat-containing protein 44-like
sbi-r.1	8078001	WD repeat-containing protein 44
sbi-r.1	8057600	WD repeat-containing protein 44
sbi-r.1	8066202	WD repeat-containing protein 44
bdi-r.1	100825146	WD repeat-containing protein 44
bdi-r.1	100825540	WD repeat-containing protein 44
bdi-r.1	100827380	WD repeat-containing protein 44
cre-r.1	CHLRE_06g276100v5	uncharacterized protein

Top 50 coexpressed genes to 102579447 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102579447 (sot-r.1 coexpression data)

CoexMap"102579447"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4214 genes)

IEA

Protein

XP_006352232.1 [sequence] [blastp]
XP_006352233.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for XP_006352232.1)
nucl 9, cyto_nucl 5	(predict for XP_006352233.1)

Subcellular
localization
TargetP

other 8	(predict for XP_006352232.1)
other 8	(predict for XP_006352233.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102579447	sot-r.1 for 102585613	sot-r.1 for 102596826	sly-u.5 for 101256031	sly-u.5 for 101260733	sly-u.5 for 101249662	nta-r.1 for 107766553	nta-r.1 for 107769711	ath-u.5 for AT2G37670	ath-u.5 for AT1G64610	ath-u.5 for AT1G48870	gma-u.5 for 100782200	gma-u.5 for 100780979	bra-r.6 for 103838192	bra-r.6 for 103844825	bra-r.6 for 103844882	vvi-u.5 for 100264190	vvi-u.5 for 100245187	vvi-u.5 for 100249640	ppo-u.5 for 7467055	ppo-u.5 for 7497266	mtr-u.5 for 11435030	mtr-u.5 for 11408556	mtr-u.5 for 25502243	ghi-r.1 for 107924375	ghi-r.1 for 107929490	ghi-r.1 for 107924161	bna-r.1 for 125576587	bna-r.1 for 111200919	cit-r.1 for 102609724	cit-r.1 for 102614368	cit-r.1 for 102618704	osa-u.5 for 9269146	osa-u.5 for 4336699	zma-u.5 for 100275689	zma-u.5 for 100281552	zma-u.5 for 100501308	tae-r.2 for 123047412	tae-r.2 for 123099072	hvu-r.1 for 123449932	hvu-r.1 for 123428340	sbi-r.1 for 8078001	sbi-r.1 for 8057600	sbi-r.1 for 8066202	bdi-r.1 for 100825146	bdi-r.1 for 100825540	bdi-r.1 for 100827380	cre-r.1 for CHLRE_06g276100v5

Ortholog

Ortholog ID: 182

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

U4/U6 small nuclear ribonucleoprotein Prp4

WD repeat-containing protein 44

uncharacterized LOC101256031

uncharacterized LOC101249662

uncharacterized LOC101245001

uncharacterized LOC107766553

WD repeat-containing protein YMR102C

uncharacterized LOC107823380

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC103850247

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

uncharacterized LOC100249640

WD repeat-containing protein YMR102C

vegetative incompatibility protein HET-E-1

uncharacterized LOC7497266

uncharacterized LOC7497506

2-deoxy-glucose resistant protein 2

uncharacterized WD repeat-containing protein alr3466

WD repeat-containing protein 44

uncharacterized LOC102609724

uncharacterized LOC102614368

WD repeat-containing protein YMR102C-like

uncharacterized LOC4336699

uncharacterized LOC4337413

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC123449932

uncharacterized WD repeat-containing protein sll0163-like

WD repeat-containing protein 44-like

WD repeat-containing protein 44

2-deoxy-glucose resistant protein 2

WD repeat-containing protein 44

uncharacterized LOC100842788

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	4
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	2
nta00790	Folate biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04016	MAPK signaling pathway - plant	4
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	3
osa00566	Sulfoquinovose metabolism	3
osa00564	Glycerophospholipid metabolism	2
osa00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00900	Terpenoid backbone biosynthesis	3
zma00620	Pyruvate metabolism	2
zma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	6
tae04626	Plant-pathogen interaction	6
tae00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	4
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

102585613

102595963

102583402

101256031

101249662

101245001

107766553

107770909

107823380

842769

831780

820786

100817209

100801576

100807177

103844882

103850247

103865619

100245187

100249640

100241604

7467055

7497266

7497506

11435030

25502243

25487371

107920400

107904514

121215517

106387484

106366726

102609724

102614368

102618704

4336699

4337413

103641627

103641868

123191051

123190040

123127830

123449932

123426697

123399755

8057600

8073010

100825146

100828955

100842788

5721740

The preparation time of this page was 0.4 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	3	2	3	3	2	3	3	2	3	2	3	2	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102579447 (sot-r.1 coexpression data)

Top 50 enrichment test to 102579447 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**