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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102585220   uncharacterized LOC102585220 
 sly-u.5   101244643   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 nta-r.1   107798336   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 nta-r.1   107764609   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ath-u.5   AT5G66180   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   100788419   uncharacterized LOC100788419 
 bra-r.6   103855353   probable ribosomal RNA small subunit methyltransferase B 
 vvi-u.5   100267747   uncharacterized LOC100267747 
 ppo-u.5   18101092   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 mtr-u.5   11439615   multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b 
 ghi-r.1   107936570   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ghi-r.1   107909458   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 bna-r.1   125581610   ribosomal RNA small subunit methyltransferase F-like 
 bna-r.1   106415834   ribosomal RNA small subunit methyltransferase F 
 bna-r.1   106406053   ribosomal RNA small subunit methyltransferase F 
 cit-r.1   102624363   uncharacterized LOC102624363 
 osa-u.5   4329164   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 zma-u.5   100284258   NOL1/NOP2/sun family protein 
 tae-r.2   123156660   ribosomal RNA small subunit methyltransferase B 
 tae-r.2   123165639   ribosomal RNA small subunit methyltransferase B 
 tae-r.2   123147447   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 hvu-r.1   123413401   ribosomal RNA small subunit methyltransferase B 
 sbi-r.1   8074085   uncharacterized LOC8074085 
 bdi-r.1   100835950   uncharacterized LOC100835950 
 bdi-r.1   104582433   uncharacterized LOC104582433 
 cre-r.1   CHLRE_13g602300v5   uncharacterized protein 

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Top 50 coexpressed genes to 102585220 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102585220 (sot-r.1 coexpression data)

CoexMap"102585220"


sotLOC102585220 | Entrez gene ID : 102585220    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 1 1 1 1 1 2 3 1 1 1 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (57 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (60 genes)  IEA  
Protein XP_006343360.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1  (predict for XP_006343360.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006343360.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102585220
sly-u.5
for
101244643
nta-r.1
for
107798336
nta-r.1
for
107764609
ath-u.5
for
AT5G66180
gma-u.5
for
100788419
bra-r.6
for
103855353
vvi-u.5
for
100267747
ppo-u.5
for
18101092
mtr-u.5
for
11439615
ghi-r.1
for
107936570
ghi-r.1
for
107909458
bna-r.1
for
125581610
bna-r.1
for
106415834
bna-r.1
for
106406053
cit-r.1
for
102624363
osa-u.5
for
4329164
zma-u.5
for
100284258
tae-r.2
for
123156660
tae-r.2
for
123165639
tae-r.2
for
123147447
hvu-r.1
for
123413401
sbi-r.1
for
8074085
bdi-r.1
for
100835950
bdi-r.1
for
104582433
cre-r.1
for
CHLRE_13g602300v5


Ortholog ID: 9197
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC102585220 LOC101244643 LOC107798336 LOC107764609 AT5G66180 LOC100788419 LOC103855353 LOC100267747 LOC18101092 LOC11439615 LOC107936570 LOC107909458 LOC125581610 LOC106415834 LOC106406053 LOC102624363 LOC4329164 LOC100284258 LOC123156660 LOC123165639 LOC123147447 LOC123413401 LOC8074085 LOC100835950 LOC104582433 CHLRE_13g602300v5
Function* uncharacterized LOC102585220 rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C S-adenosyl-L-methionine-dependent methyltransferases superfamily protein uncharacterized LOC100788419 probable ribosomal RNA small subunit methyltransferase B uncharacterized LOC100267747 rRNA (cytosine-C(5))-methyltransferase NOP2C multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C ribosomal RNA small subunit methyltransferase F-like ribosomal RNA small subunit methyltransferase F ribosomal RNA small subunit methyltransferase F uncharacterized LOC102624363 rRNA (cytosine-C(5))-methyltransferase NOP2C NOL1/NOP2/sun family protein ribosomal RNA small subunit methyltransferase B ribosomal RNA small subunit methyltransferase B rRNA (cytosine-C(5))-methyltransferase NOP2C ribosomal RNA small subunit methyltransferase B uncharacterized LOC8074085 uncharacterized LOC100835950 uncharacterized LOC104582433 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102585220 101244643 107798336 107764609 836750 100788419 103855353 100267747 18101092 11439615 107936570 107909458 125581610 106415834 106406053 102624363 4329164 100284258 123156660 123165639 123147447 123413401 8074085 100835950 104582433 66056090
The preparation time of this page was 1.6 [sec].