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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125581610   ribosomal RNA small subunit methyltransferase F-like 
 bna-r.1   106415834   ribosomal RNA small subunit methyltransferase F 
 bna-r.1   106406053   ribosomal RNA small subunit methyltransferase F 
 bna-r.1   125606634   ribosomal RNA small subunit methyltransferase F-like 
 bra-r.6   103855353   probable ribosomal RNA small subunit methyltransferase B 
 ath-u.5   AT5G66180   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ghi-r.1   107936570   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 ghi-r.1   107909458   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 cit-r.1   102624363   uncharacterized LOC102624363 
 gma-u.5   100788419   uncharacterized LOC100788419 
 vvi-u.5   100267747   uncharacterized LOC100267747 
 ppo-u.5   18101092   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 mtr-u.5   11439615   multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b 
 sly-u.5   101244643   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 sot-r.1   102585220   uncharacterized LOC102585220 
 nta-r.1   107798336   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 nta-r.1   107764609   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 osa-u.5   4329164   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 zma-u.5   100284258   NOL1/NOP2/sun family protein 
 tae-r.2   123147447   rRNA (cytosine-C(5))-methyltransferase NOP2C 
 tae-r.2   123156660   ribosomal RNA small subunit methyltransferase B 
 tae-r.2   123165639   ribosomal RNA small subunit methyltransferase B 
 hvu-r.1   123413401   ribosomal RNA small subunit methyltransferase B 
 sbi-r.1   8074085   uncharacterized LOC8074085 
 bdi-r.1   104582433   uncharacterized LOC104582433 
 bdi-r.1   100835950   uncharacterized LOC100835950 
 cre-r.1   CHLRE_13g602300v5   uncharacterized protein 

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Top 50 coexpressed genes to 125581610 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125581610 (bna-r.1 coexpression data)

CoexMap"125581610"


bnaLOC125581610 | Entrez gene ID : 125581610    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (170 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (844 genes)  IEA  
Protein XP_048603306.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for XP_048603306.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048603306.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125581610
bna-r.1
for
106415834
bna-r.1
for
106406053
bna-r.1
for
125606634
bra-r.6
for
103855353
ath-u.5
for
AT5G66180
ghi-r.1
for
107936570
ghi-r.1
for
107909458
cit-r.1
for
102624363
gma-u.5
for
100788419
vvi-u.5
for
100267747
ppo-u.5
for
18101092
mtr-u.5
for
11439615
sly-u.5
for
101244643
sot-r.1
for
102585220
nta-r.1
for
107798336
nta-r.1
for
107764609
osa-u.5
for
4329164
zma-u.5
for
100284258
tae-r.2
for
123147447
tae-r.2
for
123156660
tae-r.2
for
123165639
hvu-r.1
for
123413401
sbi-r.1
for
8074085
bdi-r.1
for
104582433
bdi-r.1
for
100835950
cre-r.1
for
CHLRE_13g602300v5


Ortholog ID: 9197
Species bna bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC125581610 LOC106415834 LOC106406053 LOC103855353 AT5G66180 LOC107936570 LOC107909458 LOC102624363 LOC100788419 LOC100267747 LOC18101092 LOC11439615 LOC101244643 LOC102585220 LOC107798336 LOC107764609 LOC4329164 LOC100284258 LOC123147447 LOC123156660 LOC123165639 LOC123413401 LOC8074085 LOC104582433 LOC100835950 CHLRE_13g602300v5
Function* ribosomal RNA small subunit methyltransferase F-like ribosomal RNA small subunit methyltransferase F ribosomal RNA small subunit methyltransferase F probable ribosomal RNA small subunit methyltransferase B S-adenosyl-L-methionine-dependent methyltransferases superfamily protein rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C uncharacterized LOC102624363 uncharacterized LOC100788419 uncharacterized LOC100267747 rRNA (cytosine-C(5))-methyltransferase NOP2C multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b rRNA (cytosine-C(5))-methyltransferase NOP2C uncharacterized LOC102585220 rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C NOL1/NOP2/sun family protein rRNA (cytosine-C(5))-methyltransferase NOP2C ribosomal RNA small subunit methyltransferase B ribosomal RNA small subunit methyltransferase B ribosomal RNA small subunit methyltransferase B uncharacterized LOC8074085 uncharacterized LOC104582433 uncharacterized LOC100835950 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125581610 106415834 106406053 103855353 836750 107936570 107909458 102624363 100788419 100267747 18101092 11439615 101244643 102585220 107798336 107764609 4329164 100284258 123147447 123156660 123165639 123413401 8074085 104582433 100835950 66056090
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