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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959865   pentatricopeptide repeat-containing protein At3g58590 
 ghi-r.1   107955130   pentatricopeptide repeat-containing protein At3g58590 
 ath-u.5   AT3G58590   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103862972   pentatricopeptide repeat-containing protein At3g58590 
 cit-r.1   102614011   pentatricopeptide repeat-containing protein At3g58590 
 gma-u.5   100781755   pentatricopeptide repeat-containing protein At3g58590 
 vvi-u.5   100247242   pentatricopeptide repeat-containing protein At3g58590 
 ppo-u.5   7467460   pentatricopeptide repeat-containing protein At3g58590 
 mtr-u.5   25495440   pentatricopeptide repeat-containing protein At3g58590 
 sly-u.5   101267541   pentatricopeptide repeat-containing protein At3g58590 
 sot-r.1   107060869   pentatricopeptide repeat-containing protein At3g58590-like 
 sot-r.1   107060870   pentatricopeptide repeat-containing protein At3g58590-like 
 nta-r.1   107816118   pentatricopeptide repeat-containing protein At3g58590-like 
 nta-r.1   107793954   pentatricopeptide repeat-containing protein At3g58590 
 osa-u.5   9271701   pentatricopeptide repeat-containing protein At3g58590 
 zma-u.5   103651197   pentatricopeptide repeat-containing protein At3g58590 
 bdi-r.1   104582865   pentatricopeptide repeat-containing protein At3g58590 

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Top 50 coexpressed genes to 107959865 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959865 (ghi-r.1 coexpression data)

CoexMap"107959865"


ghiLOC107959865 | Entrez gene ID : 107959865    
Species ghi ath bra cit gma vvi ppo mtr sly sot nta osa zma bdi sbi tae bna hvu cre
Paralog 2 1 1 1 1 1 1 1 1 2 2 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016751524.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_016751524.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_016751524.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959865
ghi-r.1
for
107955130
ath-u.5
for
AT3G58590
bra-r.6
for
103862972
cit-r.1
for
102614011
gma-u.5
for
100781755
vvi-u.5
for
100247242
ppo-u.5
for
7467460
mtr-u.5
for
25495440
sly-u.5
for
101267541
sot-r.1
for
107060869
sot-r.1
for
107060870
nta-r.1
for
107816118
nta-r.1
for
107793954
osa-u.5
for
9271701
zma-u.5
for
103651197
bdi-r.1
for
104582865


Ortholog ID: 10831
Species ghi ghi ath bra cit gma vvi ppo mtr sly sot sot nta nta osa zma bdi
Symbol LOC107959865 LOC107955130 AT3G58590 LOC103862972 LOC102614011 LOC100781755 LOC100247242 LOC7467460 LOC25495440 LOC101267541 LOC107060869 LOC107060870 LOC107816118 LOC107793954 LOC9271701 LOC103651197 LOC104582865
Function* pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959865 107955130 825028 103862972 102614011 100781755 100247242 7467460 25495440 101267541 107060869 107060870 107816118 107793954 9271701 103651197 104582865
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