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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107955130  pentatricopeptide repeat-containing protein At3g58590 
 ath-u.5  AT3G58590  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100781755  pentatricopeptide repeat-containing protein At3g58590 
 vvi-u.5  100247242  pentatricopeptide repeat-containing protein At3g58590 
 ppo-u.5  7467460  pentatricopeptide repeat-containing protein At3g58590 
 mtr-u.5  25495440  pentatricopeptide repeat-containing protein At3g58590 
 sly-u.5  101267541  pentatricopeptide repeat-containing protein At3g58590 
 osa-u.5  9271701  pentatricopeptide repeat-containing protein At3g58590 
 zma-u.5  103651197  pentatricopeptide repeat-containing protein At3g58590 

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Top 50 coexpressed genes to 107955130 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107955130 (ghi-r.1 coexpression data)

CoexMap"107955130"


ghiLOC107955130 | Entrez gene ID : 107955130
Species ghi ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi cre bna nta bdi bra
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016746342.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_016746342.2)
Subcellular
localization
TargetP
mito 3  (predict for XP_016746342.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107955130

.

ath-u.5
for
AT3G58590

.

gma-u.5
for
100781755

.

vvi-u.5
for
100247242

.

ppo-u.5
for
7467460

.

mtr-u.5
for
25495440

.

sly-u.5
for
101267541

.

osa-u.5
for
9271701

.

zma-u.5
for
103651197

.


Ortholog ID: 10831
Species ath gma sly osa zma bra vvi ppo mtr ghi ghi sot sot cit bdi nta nta
Symbol AT3G58590 LOC100781755 LOC101267541 LOC9271701 LOC103651197 LOC103862972 LOC100247242 LOC7467460 LOC25495440 LOC107959865 LOC107955130 LOC107060869 LOC107060870 LOC102614011 LOC104582865 LOC107793954 LOC107816118
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825028 100781755 101267541 9271701 103651197 103862972 100247242 7467460 25495440 107959865 107955130 107060869 107060870 102614011 104582865 107793954 107816118
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