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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107793954  pentatricopeptide repeat-containing protein At3g58590 
 sly-u.5  101267541  pentatricopeptide repeat-containing protein At3g58590 
 ath-u.5  AT3G58590  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100781755  pentatricopeptide repeat-containing protein At3g58590 
 vvi-u.5  100247242  pentatricopeptide repeat-containing protein At3g58590 
 ppo-u.5  7467460  pentatricopeptide repeat-containing protein At3g58590 
 mtr-u.5  25495440  pentatricopeptide repeat-containing protein At3g58590 
 osa-u.5  9271701  pentatricopeptide repeat-containing protein At3g58590 
 zma-u.5  103651197  pentatricopeptide repeat-containing protein At3g58590 

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Top 50 coexpressed genes to 107793954 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107793954 (nta-r.1 coexpression data)

CoexMap"107793954"


ntaLOC107793954 | Entrez gene ID : 107793954
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016471892.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  mito_plas 1  (predict for XP_016471892.2)
Subcellular
localization
TargetP
chlo 2  (predict for XP_016471892.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107793954


sly-u.5
for
101267541


ath-u.5
for
AT3G58590


gma-u.5
for
100781755


vvi-u.5
for
100247242


ppo-u.5
for
7467460


mtr-u.5
for
25495440


osa-u.5
for
9271701


zma-u.5
for
103651197



Ortholog ID: 10831
Species nta nta sly sot sot ath gma bra vvi ppo mtr ghi ghi cit osa zma bdi
Symbol LOC107793954 LOC107816118 LOC101267541 LOC107060869 LOC107060870 AT3G58590 LOC100781755 LOC103862972 LOC100247242 LOC7467460 LOC25495440 LOC107959865 LOC107955130 LOC102614011 LOC9271701 LOC103651197 LOC104582865
Function* pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590-like pentatricopeptide repeat-containing protein At3g58590-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590 pentatricopeptide repeat-containing protein At3g58590
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107793954 107816118 101267541 107060869 107060870 825028 100781755 103862972 100247242 7467460 25495440 107959865 107955130 102614011 9271701 103651197 104582865
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