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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106435517  50S ribosomal protein L34, chloroplastic 
 bna-r.1  106402165  50S ribosomal protein L34, chloroplastic 
 bna-r.1  106358617  50S ribosomal protein L34, chloroplastic 
 bna-r.1  111204687  50S ribosomal protein L34, chloroplastic-like 
 bra-r.6  103847913  50S ribosomal protein L34, chloroplastic 
 bra-r.6  103835300  50S ribosomal protein L34, chloroplastic 
 ath-u.5  AT1G29070  Ribosomal protein L34 
 ghi-r.1  107905374  50S ribosomal protein L34, chloroplastic 
 ghi-r.1  107962264  50S ribosomal protein L34, chloroplastic 
 ghi-r.1  107901732  50S ribosomal protein L34, chloroplastic 
 cit-r.1  102617030  50S ribosomal protein L34, chloroplastic 
 gma-u.5  100500433  50S ribosomal protein L34 
 gma-u.5  100526907  50S ribosomal protein L34 
 vvi-u.5  100258321  large ribosomal subunit protein bL34c 
 ppo-u.5  7455917  50S ribosomal protein L34, chloroplastic 
 mtr-u.5  11423417  50S ribosomal protein L34, chloroplastic 
 sly-u.5  101259190  large ribosomal subunit protein bL34c 
 sot-r.1  102588229  50S ribosomal protein L34, chloroplastic 
 nta-r.1  107804469  large ribosomal subunit protein bL34c-like 
 nta-r.1  107775341  large ribosomal subunit protein bL34c 
 osa-u.5  4327541  large ribosomal subunit protein bL34c 
 zma-u.5  100282969  50S ribosomal protein L34-like 
 tae-r.2  123062334  50S ribosomal protein L34, chloroplastic 
 tae-r.2  123071100  50S ribosomal protein L34, chloroplastic 
 tae-r.2  123079472  50S ribosomal protein L34, chloroplastic 
 hvu-r.1  123444633  50S ribosomal protein L34, chloroplastic 
 sbi-r.1  110434129  50S ribosomal protein L34, chloroplastic 
 bdi-r.1  100840922  50S ribosomal protein L34, chloroplastic 
 bdi-r.1  100845574  50S ribosomal protein L34, chloroplastic 
 cre-r.1  CHLRE_01g030050v5  uncharacterized protein 

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Top 50 coexpressed genes to 106435517 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106435517 (bna-r.1 coexpression data)

CoexMap"106435517"


bnaLOC106435517 | Entrez gene ID : 106435517
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03010 [list] [network] Ribosome (7497 genes)
GO BP
GO:0006412 [list] [network] translation  (1842 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (79 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1367 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1340 genes)  IEA  
Protein XP_013731869.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_013731869.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013731869.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106435517


bna-r.1
for
106402165


bna-r.1
for
106358617


bna-r.1
for
111204687


bra-r.6
for
103847913


bra-r.6
for
103835300


ath-u.5
for
AT1G29070


ghi-r.1
for
107905374


ghi-r.1
for
107962264


ghi-r.1
for
107901732


cit-r.1
for
102617030


gma-u.5
for
100500433


gma-u.5
for
100526907


vvi-u.5
for
100258321


ppo-u.5
for
7455917


mtr-u.5
for
11423417


sly-u.5
for
101259190


sot-r.1
for
102588229


nta-r.1
for
107804469


nta-r.1
for
107775341


osa-u.5
for
4327541


zma-u.5
for
100282969


tae-r.2
for
123062334


tae-r.2
for
123071100


tae-r.2
for
123079472


hvu-r.1
for
123444633


sbi-r.1
for
110434129


bdi-r.1
for
100840922


bdi-r.1
for
100845574


cre-r.1
for
CHLRE_01g030050v5



Ortholog ID: 6722
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC106402165 LOC106358617 LOC111204687 LOC103847913 LOC103835300 AT1G29070 LOC107905374 LOC107962264 LOC107901732 LOC102617030 LOC100500433 LOC100526907 LOC100258321 LOC7455917 LOC11423417 LOC101259190 LOC102588229 LOC107804469 LOC107775341 LOC4327541 LOC100282969 LOC123062334 LOC123071100 LOC123079472 LOC123444633 LOC110434129 LOC100840922 LOC100845574 CHLRE_01g030050v5
Function* 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic-like 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic Ribosomal protein L34 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34 50S ribosomal protein L34 large ribosomal subunit protein bL34c 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic large ribosomal subunit protein bL34c 50S ribosomal protein L34, chloroplastic large ribosomal subunit protein bL34c-like large ribosomal subunit protein bL34c large ribosomal subunit protein bL34c 50S ribosomal protein L34-like 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic 50S ribosomal protein L34, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106402165 106358617 111204687 103847913 103835300 839781 107905374 107962264 107901732 102617030 100500433 100526907 100258321 7455917 11423417 101259190 102588229 107804469 107775341 4327541 100282969 123062334 123071100 123079472 123444633 110434129 100840922 100845574 5715359
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