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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103853967   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 bna-r.1   111203333   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 bna-r.1   125596212   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 bna-r.1   106348772   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 ghi-r.1   107920547   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 cit-r.1   102615621   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 gma-u.5   100817794   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 vvi-u.5   100261911   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 mtr-u.5   11417569   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 sly-u.5   101267992   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 sot-r.1   102588903   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 nta-r.1   107802969   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 nta-r.1   107771122   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 osa-u.5   4334412   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 zma-u.5   100191499   Pentatricopeptide repeat-containing protein chloroplastic 
 tae-r.2   123123175   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 tae-r.2   123113656   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 tae-r.2   123105385   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 hvu-r.1   123398817   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 sbi-r.1   8061176   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 bdi-r.1   100842371   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 

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Top 50 coexpressed genes to OTP85 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to OTP85 (ath-m.4.lig coexpression data)

CoexMap"814827"


athOTP85 | Entrez gene ID : 814827      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 9 1 3 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031425 [list] [network] chloroplast RNA processing  (28 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
Protein NP_178398.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 2,  nucl_plas 2  (predict for NP_178398.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_178398.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
OTP85
ath-u.5
for
OTP85
ath-r.7
for
OTP85
ath-m.9
for
OTP85
ath-e.2
for
OTP85
ath-m.4.bio
for
OTP85
ath-m.4.hor
for
OTP85
ath-m.4.str
for
OTP85
ath-m.4.tis
for
OTP85
bra-r.6
for
103853967
bna-r.1
for
111203333
bna-r.1
for
125596212
bna-r.1
for
106348772
ghi-r.1
for
107920547
cit-r.1
for
102615621
gma-u.5
for
100817794
vvi-u.5
for
100261911
mtr-u.5
for
11417569
sly-u.5
for
101267992
sot-r.1
for
102588903
nta-r.1
for
107802969
nta-r.1
for
107771122
osa-u.5
for
4334412
zma-u.5
for
100191499
tae-r.2
for
123123175
tae-r.2
for
123113656
tae-r.2
for
123105385
hvu-r.1
for
123398817
sbi-r.1
for
8061176
bdi-r.1
for
100842371


Ortholog ID: 11229
Species ath bra bna bna bna ghi cit gma vvi mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol OTP85 LOC103853967 LOC111203333 LOC125596212 LOC106348772 LOC107920547 LOC102615621 LOC100817794 LOC100261911 LOC11417569 LOC101267992 LOC102588903 LOC107802969 LOC107771122 LOC4334412 LOC100191499 LOC123123175 LOC123113656 LOC123105385 LOC123398817 LOC8061176 LOC100842371
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu01240 Biosynthesis of cofactors 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814827 103853967 111203333 125596212 106348772 107920547 102615621 100817794 100261911 11417569 101267992 102588903 107802969 107771122 4334412 100191499 123123175 123113656 123105385 123398817 8061176 100842371
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