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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107802969   pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like 
 sly-u.5   101267992   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 ath-u.5   OTP85   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100817794   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 vvi-u.5   100261911   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 mtr-u.5   11417569   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 osa-u.5   4334412   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 zma-u.5   100191499   Pentatricopeptide repeat-containing protein chloroplastic 

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Top 50 coexpressed genes to 107802969 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107802969 (nta-r.1 coexpression data)

CoexMap"107802969"


ntaLOC107802969 | Entrez gene ID : 107802969      
Species nta sly ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016482042.1 [sequence] [blastp]
XP_075095965.1 [sequence] [blastp]
XP_075095966.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  E.R. 3,  golg_plas 3,  cyto_plas 3  (predict for XP_016482042.1)
plas 5,  E.R. 3,  golg_plas 3,  cyto_plas 3  (predict for XP_075095965.1)
plas 5,  E.R. 3,  golg_plas 3,  cyto_plas 3  (predict for XP_075095966.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016482042.1)
other 7  (predict for XP_075095965.1)
other 7  (predict for XP_075095966.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107802969
sly-u.5
for
101267992
ath-u.5
for
OTP85
gma-u.5
for
100817794
vvi-u.5
for
100261911
mtr-u.5
for
11417569
osa-u.5
for
4334412
zma-u.5
for
100191499


Ortholog ID: 11229
Species nta nta sly sot ath gma bra vvi mtr ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107802969 LOC107771122 LOC101267992 LOC102588903 OTP85 LOC100817794 LOC103853967 LOC100261911 LOC11417569 LOC107920547 LOC111203333 LOC125596212 LOC102615621 LOC4334412 LOC100191499 LOC123105385 LOC123113656 LOC123398817 LOC8061176 LOC100842371
Function* pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu01240 Biosynthesis of cofactors 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107802969 107771122 101267992 102588903 814827 100817794 103853967 100261911 11417569 107920547 111203333 125596212 102615621 4334412 100191499 123105385 123113656 123398817 8061176 100842371
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