ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123105385	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
tae-r.2	123113656	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
tae-r.2	123123175	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like
hvu-r.1	123398817	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
bdi-r.1	100842371	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
osa-u.5	4334412	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
zma-u.5	100191499	Pentatricopeptide repeat-containing protein chloroplastic
sbi-r.1	8061176	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
ath-u.5	OTP85	Pentatricopeptide repeat (PPR) superfamily protein
gma-u.5	100817794	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
sly-u.5	101267992	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
bra-r.6	103853967	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
vvi-u.5	100261911	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
mtr-u.5	11417569	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
ghi-r.1	107920547	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
bna-r.1	111203333	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like
bna-r.1	106348772	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like
bna-r.1	125596212	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like
sot-r.1	102588903	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
cit-r.1	102615621	pentatricopeptide repeat-containing protein At2g02980, chloroplastic
nta-r.1	107771122	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like
nta-r.1	107802969	pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(1066 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(2838 genes)	IEA
GO:0003723 [list] [network] RNA binding	(4004 genes)	IEA
GO:0005515 [list] [network] protein binding	(16249 genes)	IEA

Protein

XP_044383376.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1

(predict for XP_044383376.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_044383376.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123105385	tae-r.2 for 123113656	tae-r.2 for 123123175	hvu-r.1 for 123398817	bdi-r.1 for 100842371	osa-u.5 for 4334412	zma-u.5 for 100191499	sbi-r.1 for 8061176	ath-u.5 for OTP85	gma-u.5 for 100817794	sly-u.5 for 101267992	bra-r.6 for 103853967	vvi-u.5 for 100261911	mtr-u.5 for 11417569	ghi-r.1 for 107920547	bna-r.1 for 111203333	bna-r.1 for 106348772	bna-r.1 for 125596212	sot-r.1 for 102588903	cit-r.1 for 102615621	nta-r.1 for 107771122	nta-r.1 for 107802969

Ortholog

Ortholog ID: 11229

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

mtr

ghi

bna

sot

cit

nta

Symbol

OTP85

Function^*