ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.lig	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-u.5	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-r.7	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-m.9	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-e.2	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-m.4.bio	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-m.4.hor	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-m.4.str	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
ath-m.4.tis	AT1G06440	Ubiquitin carboxyl-terminal hydrolase family protein
bra-r.6	103844040	protein ROOT PRIMORDIUM DEFECTIVE 1
ghi-r.1	107948533	protein ROOT PRIMORDIUM DEFECTIVE 1
cit-r.1	102620508	protein ROOT PRIMORDIUM DEFECTIVE 1
gma-u.5	100808404	protein ROOT PRIMORDIUM DEFECTIVE 1
vvi-u.5	100261573	protein ROOT PRIMORDIUM DEFECTIVE 1
mtr-u.5	25489191	protein ROOT PRIMORDIUM DEFECTIVE 1
sly-u.5	101250659	protein ROOT PRIMORDIUM DEFECTIVE 1
sot-r.1	102604148	protein ROOT PRIMORDIUM DEFECTIVE 1
nta-r.1	107827006	protein ROOT PRIMORDIUM DEFECTIVE 1
nta-r.1	107795981	protein ROOT PRIMORDIUM DEFECTIVE 1
osa-u.5	4349088	protein ROOT PRIMORDIUM DEFECTIVE 1
zma-u.5	103643378	protein ROOT PRIMORDIUM DEFECTIVE 1
tae-r.2	123181305	protein ROOT PRIMORDIUM DEFECTIVE 1
tae-r.2	123124821	protein ROOT PRIMORDIUM DEFECTIVE 1
tae-r.2	123048623	protein ROOT PRIMORDIUM DEFECTIVE 1
hvu-r.1	123434368	protein ROOT PRIMORDIUM DEFECTIVE 1
sbi-r.1	8065172	protein ROOT PRIMORDIUM DEFECTIVE 1
bdi-r.1	100834624	protein ROOT PRIMORDIUM DEFECTIVE 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

GO:0003723 [list] [network] RNA binding

(1764 genes)

IEA

Protein

NP_172132.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, chlo_mito 5, mito 1

(predict for NP_172132.1)

Subcellular
localization
TargetP

mito 8

(predict for NP_172132.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.lig for AT1G06440	ath-u.5 for AT1G06440	ath-r.7 for AT1G06440	ath-m.9 for AT1G06440	ath-e.2 for AT1G06440	ath-m.4.bio for AT1G06440	ath-m.4.hor for AT1G06440	ath-m.4.str for AT1G06440	ath-m.4.tis for AT1G06440	bra-r.6 for 103844040	ghi-r.1 for 107948533	cit-r.1 for 102620508	gma-u.5 for 100808404	vvi-u.5 for 100261573	mtr-u.5 for 25489191	sly-u.5 for 101250659	sot-r.1 for 102604148	nta-r.1 for 107827006	nta-r.1 for 107795981	osa-u.5 for 4349088	zma-u.5 for 103643378	tae-r.2 for 123181305	tae-r.2 for 123124821	tae-r.2 for 123048623	hvu-r.1 for 123434368	sbi-r.1 for 8065172	bdi-r.1 for 100834624