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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  25489191  protein ROOT PRIMORDIUM DEFECTIVE 1 
 mtr-r.5  25489191  protein ROOT PRIMORDIUM DEFECTIVE 1 
 gma-u.5  100808404  protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5  AT1G06440  Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5  100261573  protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5  101250659  protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5  4349088  protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-u.5  103643378  protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to 25489191 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25489191 (mtr-u.5 coexpression data)

CoexMap"25489191"


mtrLOC25489191 | Entrez gene ID : 25489191
Species mtr gma ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_013460525.1 [sequence] [blastp]
XP_013460526.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_013460525.1)
chlo 6,  mito 4  (predict for XP_013460526.1)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for XP_013460525.1)
mito 8,  other 4  (predict for XP_013460526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
25489191


mtr-r.5
for
25489191


gma-u.5
for
100808404


ath-u.5
for
AT1G06440


vvi-u.5
for
100261573


sly-u.5
for
101250659


osa-u.5
for
4349088


zma-u.5
for
103643378



Ortholog ID: 10429
Species mtr gma ath bra vvi ghi cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC25489191 LOC100808404 AT1G06440 LOC103844040 LOC100261573 LOC107948533 LOC102620508 LOC101250659 LOC102604148 LOC107795981 LOC107827006 LOC4349088 LOC103643378 LOC123124821 LOC123048623 LOC123434368 LOC8065172 LOC100834624
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25489191 100808404 837156 103844040 100261573 107948533 102620508 101250659 102604148 107795981 107827006 4349088 103643378 123124821 123048623 123434368 8065172 100834624
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