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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT1G64880   Ribosomal protein S5 family protein 
 ath-u.5   AT1G64880   Ribosomal protein S5 family protein 
 ath-r.7   AT1G64880   Ribosomal protein S5 family protein 
 ath-m.9   AT1G64880   Ribosomal protein S5 family protein 
 ath-e.2   AT1G64880   Ribosomal protein S5 family protein 
 ath-m.4.bio   AT1G64880   Ribosomal protein S5 family protein 
 ath-m.4.hor   AT1G64880   Ribosomal protein S5 family protein 
 ath-m.4.str   AT1G64880   Ribosomal protein S5 family protein 
 ath-m.4.tis   AT1G64880   Ribosomal protein S5 family protein 
 bra-r.6   103853303   uncharacterized LOC103853303 
 bna-r.1   106388195   mRNA export factor GLE1 
 bna-r.1   106408627   uncharacterized LOC106408627 
 bna-r.1   106390386   uncharacterized LOC106390386 
 ghi-r.1   121212523   uncharacterized LOC121212523 
 ghi-r.1   107922572   uncharacterized LOC107922572 
 cit-r.1   102608648   uncharacterized LOC102608648 
 gma-u.5   100809192   DNA ligase 1 
 gma-u.5   100800084   uncharacterized LOC100800084 
 vvi-u.5   100267778   uncharacterized LOC100267778 
 ppo-u.5   7493894   uncharacterized LOC7493894 
 mtr-u.5   11439488   uncharacterized LOC11439488 
 sly-u.5   101251434   uncharacterized LOC101251434 
 sot-r.1   102603531   uncharacterized LOC102603531 
 nta-r.1   107812456   uncharacterized LOC107812456 
 nta-r.1   107770348   uncharacterized LOC107770348 
 osa-u.5   4327989   uncharacterized LOC4327989 
 zma-u.5   100281473   uncharacterized LOC100281473 
 tae-r.2   123171432   uncharacterized LOC123171432 
 tae-r.2   123157284   uncharacterized LOC123157284 
 tae-r.2   123153812   uncharacterized LOC123153812 
 hvu-r.1   123411315   uncharacterized LOC123411315 
 sbi-r.1   110434418   uncharacterized LOC110434418 
 bdi-r.1   100830533   zinc finger CCCH domain-containing protein 13 
 cre-r.1   CHLRE_09g407100v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G64880 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G64880 (ath-m.4.lig coexpression data)

CoexMap"842796"


athAT1G64880 | Entrez gene ID : 842796      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_564842.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 1,  nucl 1  (predict for NP_564842.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for NP_564842.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT1G64880
ath-u.5
for
AT1G64880
ath-r.7
for
AT1G64880
ath-m.9
for
AT1G64880
ath-e.2
for
AT1G64880
ath-m.4.bio
for
AT1G64880
ath-m.4.hor
for
AT1G64880
ath-m.4.str
for
AT1G64880
ath-m.4.tis
for
AT1G64880
bra-r.6
for
103853303
bna-r.1
for
106388195
bna-r.1
for
106408627
bna-r.1
for
106390386
ghi-r.1
for
121212523
ghi-r.1
for
107922572
cit-r.1
for
102608648
gma-u.5
for
100809192
gma-u.5
for
100800084
vvi-u.5
for
100267778
ppo-u.5
for
7493894
mtr-u.5
for
11439488
sly-u.5
for
101251434
sot-r.1
for
102603531
nta-r.1
for
107812456
nta-r.1
for
107770348
osa-u.5
for
4327989
zma-u.5
for
100281473
tae-r.2
for
123171432
tae-r.2
for
123157284
tae-r.2
for
123153812
hvu-r.1
for
123411315
sbi-r.1
for
110434418
bdi-r.1
for
100830533
cre-r.1
for
CHLRE_09g407100v5


Ortholog ID: 9863
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G64880 LOC103853303 LOC106388195 LOC106408627 LOC106390386 LOC121212523 LOC107922572 LOC102608648 LOC100809192 LOC100800084 LOC100267778 LOC7493894 LOC11439488 LOC101251434 LOC102603531 LOC107812456 LOC107770348 LOC4327989 LOC100281473 LOC123171432 LOC123157284 LOC123153812 LOC123411315 LOC110434418 LOC100830533 CHLRE_09g407100v5
Function* Ribosomal protein S5 family protein uncharacterized LOC103853303 mRNA export factor GLE1 uncharacterized LOC106408627 uncharacterized LOC106390386 uncharacterized LOC121212523 uncharacterized LOC107922572 uncharacterized LOC102608648 DNA ligase 1 uncharacterized LOC100800084 uncharacterized LOC100267778 uncharacterized LOC7493894 uncharacterized LOC11439488 uncharacterized LOC101251434 uncharacterized LOC102603531 uncharacterized LOC107812456 uncharacterized LOC107770348 uncharacterized LOC4327989 uncharacterized LOC100281473 uncharacterized LOC123171432 uncharacterized LOC123157284 uncharacterized LOC123153812 uncharacterized LOC123411315 uncharacterized LOC110434418 zinc finger CCCH domain-containing protein 13 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00230 Purine metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 10
bna03010 Ribosome 3
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 9
bna03010 Ribosome 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 9
bna03010 Ribosome 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842796 103853303 106388195 106408627 106390386 121212523 107922572 102608648 100809192 100800084 100267778 7493894 11439488 101251434 102603531 107812456 107770348 4327989 100281473 123171432 123157284 123153812 123411315 110434418 100830533 5723231
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