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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922572   uncharacterized LOC107922572 
 ath-u.5   AT1G64880   Ribosomal protein S5 family protein 
 gma-u.5   100809192   DNA ligase 1 
 gma-u.5   100800084   uncharacterized LOC100800084 
 vvi-u.5   100267778   uncharacterized LOC100267778 
 ppo-u.5   7493894   uncharacterized LOC7493894 
 mtr-u.5   11439488   uncharacterized LOC11439488 
 sly-u.5   101251434   uncharacterized LOC101251434 
 osa-u.5   4327989   uncharacterized LOC4327989 
 zma-u.5   100281473   uncharacterized LOC100281473 

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Top 50 coexpressed genes to 107922572 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922572 (ghi-r.1 coexpression data)

CoexMap"107922572"


ghiLOC107922572 | Entrez gene ID : 107922572    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016708154.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016708154.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016708154.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922572
ath-u.5
for
AT1G64880
gma-u.5
for
100809192
gma-u.5
for
100800084
vvi-u.5
for
100267778
ppo-u.5
for
7493894
mtr-u.5
for
11439488
sly-u.5
for
101251434
osa-u.5
for
4327989
zma-u.5
for
100281473


Ortholog ID: 9863
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC121212523 LOC107922572 AT1G64880 LOC103853303 LOC106390386 LOC106408627 LOC102608648 LOC100800084 LOC100809192 LOC100267778 LOC7493894 LOC11439488 LOC101251434 LOC102603531 LOC107812456 LOC107770348 LOC4327989 LOC100281473 LOC123157284 LOC123171432 LOC123411315 LOC110434418 LOC100830533 CHLRE_09g407100v5
Function* uncharacterized LOC121212523 uncharacterized LOC107922572 Ribosomal protein S5 family protein uncharacterized LOC103853303 uncharacterized LOC106390386 uncharacterized LOC106408627 uncharacterized LOC102608648 uncharacterized LOC100800084 DNA ligase 1 uncharacterized LOC100267778 uncharacterized LOC7493894 uncharacterized LOC11439488 uncharacterized LOC101251434 uncharacterized LOC102603531 uncharacterized LOC107812456 uncharacterized LOC107770348 uncharacterized LOC4327989 uncharacterized LOC100281473 uncharacterized LOC123157284 uncharacterized LOC123171432 uncharacterized LOC123411315 uncharacterized LOC110434418 zinc finger CCCH domain-containing protein 13 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00230 Purine metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 9
bna03010 Ribosome 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 9
bna03010 Ribosome 3
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121212523 107922572 842796 103853303 106390386 106408627 102608648 100800084 100809192 100267778 7493894 11439488 101251434 102603531 107812456 107770348 4327989 100281473 123157284 123171432 123411315 110434418 100830533 5723231
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