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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103830373   pentatricopeptide repeat-containing protein At3g62890 
 bna-r.1   106353326   pentatricopeptide repeat-containing protein At3g62890 
 cit-r.1   102621080   pentatricopeptide repeat-containing protein At5g66520-like 
 gma-u.5   102662618   pentatricopeptide repeat-containing protein At3g62890 
 gma-u.5   100798950   pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5   120577581   pentatricopeptide repeat-containing protein At4g21065 
 sly-u.5   101257703   pentatricopeptide repeat-containing protein At3g62890 
 sly-u.5   101245194   pentatricopeptide repeat-containing protein At4g21065-like 
 sot-r.1   102599155   pentatricopeptide repeat-containing protein At2g34400-like 
 sot-r.1   102600737   pentatricopeptide repeat-containing protein At3g62890 
 sot-r.1   102604723   pentatricopeptide repeat-containing protein At4g21065-like 
 nta-r.1   107788854   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107788715   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107826186   pentatricopeptide repeat-containing protein At5g66520-like 
 osa-u.5   4328404   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   100193546   Pentatricopeptide repeat-containing protein 
 hvu-r.1   123404502   pentatricopeptide repeat-containing protein At4g21065-like 
 bdi-r.1   100843058   pentatricopeptide repeat-containing protein At5g56310 

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Top 50 coexpressed genes to AT3G62890 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G62890 (ath-m.4.str coexpression data)

CoexMap"825464"


athAT3G62890 | Entrez gene ID : 825464      
Species ath bra bna cit gma mtr sly sot nta osa zma hvu bdi cre vvi ppo tae ghi sbi
Paralog 9 1 1 1 2 1 2 3 3 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_191848.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_191848.2)
Subcellular
localization
TargetP
chlo 2  (predict for NP_191848.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT3G62890
ath-u.5
for
AT3G62890
ath-r.7
for
AT3G62890
ath-m.9
for
AT3G62890
ath-e.2
for
AT3G62890
ath-m.4.bio
for
AT3G62890
ath-m.4.hor
for
AT3G62890
ath-m.4.lig
for
AT3G62890
ath-m.4.tis
for
AT3G62890
bra-r.6
for
103830373
bna-r.1
for
106353326
cit-r.1
for
102621080
gma-u.5
for
102662618
gma-u.5
for
100798950
mtr-u.5
for
120577581
sly-u.5
for
101257703
sly-u.5
for
101245194
sot-r.1
for
102599155
sot-r.1
for
102600737
sot-r.1
for
102604723
nta-r.1
for
107788854
nta-r.1
for
107788715
nta-r.1
for
107826186
osa-u.5
for
4328404
zma-u.5
for
100193546
hvu-r.1
for
123404502
bdi-r.1
for
100843058


Ortholog ID: 8069
Species ath bra bna cit gma gma mtr sly sly sot sot sot nta nta nta osa zma hvu bdi
Symbol AT3G62890 LOC103830373 LOC106353326 LOC102621080 LOC102662618 LOC100798950 LOC120577581 LOC101257703 LOC101245194 LOC102600737 LOC107059005 LOC107059004 LOC107788854 LOC107788715 LOC107826186 LOC4328404 LOC100193546 LOC123404502 LOC100843058
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At2g36730-like pentatricopeptide repeat-containing protein At2g36730 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At4g21065 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825464 103830373 106353326 102621080 102662618 100798950 120577581 101257703 101245194 102600737 107059005 107059004 107788854 107788715 107826186 4328404 100193546 123404502 100843058
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