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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107788854   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107815119   pentatricopeptide repeat-containing protein At3g62890 
 nta-r.1   107788715   pentatricopeptide repeat-containing protein At3g62890-like 
 nta-r.1   107826186   pentatricopeptide repeat-containing protein At5g66520-like 
 sly-u.5   101257703   pentatricopeptide repeat-containing protein At3g62890 
 sly-u.5   101245194   pentatricopeptide repeat-containing protein At4g21065-like 
 sot-r.1   107058820   pentatricopeptide repeat-containing protein At5g56310-like 
 sot-r.1   107059004   pentatricopeptide repeat-containing protein At2g36730 
 sot-r.1   107059005   pentatricopeptide repeat-containing protein At2g36730-like 
 ath-u.5   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   102662618   pentatricopeptide repeat-containing protein At3g62890 
 gma-u.5   100798950   pentatricopeptide repeat-containing protein At4g21065 
 bra-r.6   103830373   pentatricopeptide repeat-containing protein At3g62890 
 mtr-u.5   120577581   pentatricopeptide repeat-containing protein At4g21065 
 bna-r.1   106353326   pentatricopeptide repeat-containing protein At3g62890 
 cit-r.1   102621080   pentatricopeptide repeat-containing protein At5g66520-like 
 osa-u.5   4328404   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   100193546   Pentatricopeptide repeat-containing protein 
 hvu-r.1   123404502   pentatricopeptide repeat-containing protein At4g21065-like 
 bdi-r.1   100843058   pentatricopeptide repeat-containing protein At5g56310 

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Top 50 coexpressed genes to 107788854 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107788854 (nta-r.1 coexpression data)

CoexMap"107788854"


ntaLOC107788854 | Entrez gene ID : 107788854      
Species nta sly sot ath gma bra mtr bna cit osa zma hvu bdi vvi tae ppo cre sbi ghi
Paralog 4 2 3 1 2 1 1 1 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075100749.1 [sequence] [blastp]
XP_075100750.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_075100749.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_075100750.1)
Subcellular
localization
TargetP
other 2  (predict for XP_075100749.1)
other 2  (predict for XP_075100750.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107788854
nta-r.1
for
107815119
nta-r.1
for
107788715
nta-r.1
for
107826186
sly-u.5
for
101257703
sly-u.5
for
101245194
sot-r.1
for
107058820
sot-r.1
for
107059004
sot-r.1
for
107059005
ath-u.5
for
AT3G62890
gma-u.5
for
102662618
gma-u.5
for
100798950
bra-r.6
for
103830373
mtr-u.5
for
120577581
bna-r.1
for
106353326
cit-r.1
for
102621080
osa-u.5
for
4328404
zma-u.5
for
100193546
hvu-r.1
for
123404502
bdi-r.1
for
100843058


Ortholog ID: 8069
Species nta nta nta sly sly sot sot sot ath gma gma bra mtr bna cit osa zma hvu bdi
Symbol LOC107788854 LOC107788715 LOC107826186 LOC101257703 LOC101245194 LOC107059004 LOC107059005 LOC102600737 AT3G62890 LOC102662618 LOC100798950 LOC103830373 LOC120577581 LOC106353326 LOC102621080 LOC4328404 LOC100193546 LOC123404502 LOC100843058
Function* pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At3g62890-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At2g36730 pentatricopeptide repeat-containing protein At2g36730-like pentatricopeptide repeat-containing protein At3g62890 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At4g21065 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107788854 107788715 107826186 101257703 101245194 107059004 107059005 102600737 825464 102662618 100798950 103830373 120577581 106353326 102621080 4328404 100193546 123404502 100843058
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