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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   107059004   pentatricopeptide repeat-containing protein At2g36730 
 sly-u.5   101257703   pentatricopeptide repeat-containing protein At3g62890 
 sly-u.5   101245194   pentatricopeptide repeat-containing protein At4g21065-like 
 ath-u.5   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   102662618   pentatricopeptide repeat-containing protein At3g62890 
 gma-u.5   100798950   pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5   120577581   pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5   4328404   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   100193546   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107059004 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107059004 (sot-r.1 coexpression data)

CoexMap"107059004"


sotLOC107059004 | Entrez gene ID : 107059004    
Species sot sly ath gma mtr osa zma tae hvu vvi cit bra ghi ppo sbi bdi nta bna cre
Paralog 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015160852.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 2,  mito_plas 2,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_015160852.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_015160852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
107059004
sly-u.5
for
101257703
sly-u.5
for
101245194
ath-u.5
for
AT3G62890
gma-u.5
for
102662618
gma-u.5
for
100798950
mtr-u.5
for
120577581
osa-u.5
for
4328404
zma-u.5
for
100193546


Ortholog ID: 8069
Species sot sot sly sly nta nta ath gma gma bra mtr bna cit osa zma hvu bdi
Symbol LOC102600737 LOC107059004 LOC101245194 LOC101257703 LOC107826186 LOC107788854 AT3G62890 LOC102662618 LOC100798950 LOC103830373 LOC120577581 LOC106353326 LOC102621080 LOC4328404 LOC100193546 LOC123404502 LOC100843058
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At2g36730 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At4g21065 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600737 107059004 101245194 101257703 107826186 107788854 825464 102662618 100798950 103830373 120577581 106353326 102621080 4328404 100193546 123404502 100843058
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