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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4328404   pentatricopeptide repeat-containing protein At4g21065 
 osa-r.6   4328404   pentatricopeptide repeat-containing protein At4g21065 
 osa-m.8   4328404   pentatricopeptide repeat-containing protein At4g21065 
 osa-e.1   4328404   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   100193546   Pentatricopeptide repeat-containing protein 
 ath-u.5   AT3G62890   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   102662618   pentatricopeptide repeat-containing protein At3g62890 
 gma-u.5   100798950   pentatricopeptide repeat-containing protein At4g21065 
 sly-u.5   101257703   pentatricopeptide repeat-containing protein At3g62890 
 sly-u.5   101245194   pentatricopeptide repeat-containing protein At4g21065-like 
 mtr-u.5   120577581   pentatricopeptide repeat-containing protein At4g21065 

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Top 50 coexpressed genes to 4328404 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4328404 (osa-u.5 coexpression data)

CoexMap"4328404"


osaLOC4328404 | Entrez gene ID : 4328404      
Species osa zma ath gma sly mtr bdi hvu bra vvi cit bna ppo sbi ghi sot nta cre tae
Paralog 4 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015623524.1 [sequence] [blastp]
XP_015623529.1 [sequence] [blastp]
XP_066164164.1 [sequence] [blastp]
XP_066164165.1 [sequence] [blastp]
XP_066164166.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015623524.1)
chlo 10  (predict for XP_015623529.1)
chlo 10  (predict for XP_066164164.1)
chlo 10  (predict for XP_066164165.1)
chlo 10  (predict for XP_066164166.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_015623524.1)
chlo 6  (predict for XP_015623529.1)
chlo 6  (predict for XP_066164164.1)
chlo 6  (predict for XP_066164165.1)
chlo 6  (predict for XP_066164166.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4328404
osa-r.6
for
4328404
osa-m.8
for
4328404
osa-e.1
for
4328404
zma-u.5
for
100193546
ath-u.5
for
AT3G62890
gma-u.5
for
102662618
gma-u.5
for
100798950
sly-u.5
for
101257703
sly-u.5
for
101245194
mtr-u.5
for
120577581


Ortholog ID: 8069
Species osa hvu bdi zma ath gma gma sly sly bra mtr bna sot sot cit nta nta
Symbol LOC4328404 LOC123404502 LOC100843058 LOC100193546 AT3G62890 LOC102662618 LOC100798950 LOC101245194 LOC101257703 LOC103830373 LOC120577581 LOC106353326 LOC102600737 LOC107059004 LOC102621080 LOC107826186 LOC107788854
Function* pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g56310 Pentatricopeptide repeat-containing protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At2g36730 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4328404 123404502 100843058 100193546 825464 102662618 100798950 101245194 101257703 103830373 120577581 106353326 102600737 107059004 102621080 107826186 107788854
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