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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   HDA14   histone deacetylase 14 
 ath-u.5   HDA14   histone deacetylase 14 
 ath-r.7   HDA14   histone deacetylase 14 
 ath-m.9   HDA14   histone deacetylase 14 
 ath-e.2   HDA14   histone deacetylase 14 
 ath-m.4.bio   HDA14   histone deacetylase 14 
 ath-m.4.hor   HDA14   histone deacetylase 14 
 ath-m.4.lig   HDA14   histone deacetylase 14 
 ath-m.4.tis   HDA14   histone deacetylase 14 
 bra-r.6   103846835   histone deacetylase 14 
 bna-r.1   106368730   histone deacetylase 14, chloroplastic 
 bna-r.1   106438528   histone deacetylase 14, chloroplastic 
 ghi-r.1   107935785   histone deacetylase 14 
 ghi-r.1   107959622   histone deacetylase 14 
 cit-r.1   102628763   histone deacetylase 14, chloroplastic 
 gma-u.5   HDA8   histone deacetylase 
 vvi-u.5   100244854   histone deacetylase-like 
 ppo-u.5   7479143   histone deacetylase 14, chloroplastic 
 mtr-u.5   11442399   histone deacetylase 14 
 sly-u.5   101251499   histone deacetylase 14, chloroplastic 
 sot-r.1   102590079   uncharacterized LOC102590079 
 sot-r.1   102589749   histone deacetylase 14 
 nta-r.1   107801462   histone deacetylase 14, chloroplastic 
 nta-r.1   107772333   histone deacetylase 14, chloroplastic 
 osa-u.5   4351682   histone deacetylase 10, chloroplastic-like 
 zma-u.5   101027153   histone deacetylase 10 
 tae-r.2   123111077   histone deacetylase 14 
 tae-r.2   123102904   histone deacetylase 14 
 tae-r.2   123120047   histone deacetylase 14 
 hvu-r.1   123399874   histone deacetylase 14 
 sbi-r.1   8085432   histone deacetylase 14 
 bdi-r.1   100845854   histone deacetylase 14 
 cre-r.1   CHLRE_06g290400v5   uncharacterized protein 

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Top 50 coexpressed genes to HDA14 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HDA14 (ath-m.4.str coexpression data)

CoexMap"829484"


athHDA14 | Entrez gene ID : 829484      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 2 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006476 [list] [network] protein deacetylation  (1 genes)  IDA  
GO:0090042 [list] [network] tubulin deacetylation  (1 genes)  IDA  
GO:0030186 [list] [network] melatonin metabolic process  (5 genes)  IDA  
GO:0042548 [list] [network] regulation of photosynthesis, light reaction  (29 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0042903 [list] [network] tubulin deacetylase activity  (1 genes)  IDA  
GO:0043014 [list] [network] alpha-tubulin binding  (1 genes)  IDA  
GO:0051721 [list] [network] protein phosphatase 2A binding  (1 genes)  IDA  
GO:0048487 [list] [network] beta-tubulin binding  (4 genes)  IDA  
GO:0004407 [list] [network] histone deacetylase activity  (17 genes)  ISS  
GO:0033558 [list] [network] protein lysine deacetylase activity  (17 genes)  IDA  
GO:0019213 [list] [network] deacetylase activity  (19 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_567921.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_567921.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_567921.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
HDA14
ath-u.5
for
HDA14
ath-r.7
for
HDA14
ath-m.9
for
HDA14
ath-e.2
for
HDA14
ath-m.4.bio
for
HDA14
ath-m.4.hor
for
HDA14
ath-m.4.lig
for
HDA14
ath-m.4.tis
for
HDA14
bra-r.6
for
103846835
bna-r.1
for
106368730
bna-r.1
for
106438528
ghi-r.1
for
107935785
ghi-r.1
for
107959622
cit-r.1
for
102628763
gma-u.5
for
HDA8
vvi-u.5
for
100244854
ppo-u.5
for
7479143
mtr-u.5
for
11442399
sly-u.5
for
101251499
sot-r.1
for
102590079
sot-r.1
for
102589749
nta-r.1
for
107801462
nta-r.1
for
107772333
osa-u.5
for
4351682
zma-u.5
for
101027153
tae-r.2
for
123111077
tae-r.2
for
123102904
tae-r.2
for
123120047
hvu-r.1
for
123399874
sbi-r.1
for
8085432
bdi-r.1
for
100845854
cre-r.1
for
CHLRE_06g290400v5


Ortholog ID: 10249
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol HDA14 LOC103846835 LOC106368730 LOC106438528 LOC107935785 LOC107959622 LOC102628763 HDA8 LOC100244854 LOC7479143 LOC11442399 LOC101251499 LOC102590079 LOC102589749 LOC107801462 LOC107772333 LOC4351682 LOC101027153 LOC123111077 LOC123102904 LOC123120047 LOC123399874 LOC8085432 LOC100845854 CHLRE_06g290400v5
Function* histone deacetylase 14 histone deacetylase 14 histone deacetylase 14, chloroplastic histone deacetylase 14, chloroplastic histone deacetylase 14 histone deacetylase 14 histone deacetylase 14, chloroplastic histone deacetylase histone deacetylase-like histone deacetylase 14, chloroplastic histone deacetylase 14 histone deacetylase 14, chloroplastic uncharacterized LOC102590079 histone deacetylase 14 histone deacetylase 14, chloroplastic histone deacetylase 14, chloroplastic histone deacetylase 10, chloroplastic-like histone deacetylase 10 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 histone deacetylase 14 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00360 Phenylalanine metabolism 2
bna00380 Tryptophan metabolism 2
bna00030 Pentose phosphate pathway 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00360 Phenylalanine metabolism 2
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 9
ghi00860 Porphyrin metabolism 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00860 Porphyrin metabolism 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00561 Glycerolipid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae04146 Peroxisome 4
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829484 103846835 106368730 106438528 107935785 107959622 102628763 100788664 100244854 7479143 11442399 101251499 102590079 102589749 107801462 107772333 4351682 101027153 123111077 123102904 123120047 123399874 8085432 100845854 5721083
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