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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-u.5   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-r.7   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.9   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-e.2   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.bio   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.hor   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.lig   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.str   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bna-r.1   125596730   pentatricopeptide repeat-containing protein At4g38010-like 
 bna-r.1   106393211   pentatricopeptide repeat-containing protein At4g38010-like 
 bna-r.1   106388894   pentatricopeptide repeat-containing protein At4g38010 
 vvi-u.5   100243207   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100265770   pentatricopeptide repeat-containing protein At4g38010 
 ppo-u.5   7484408   pentatricopeptide repeat-containing protein At4g38010 
 mtr-u.5   11424766   pentatricopeptide repeat-containing protein At4g38010 
 sot-r.1   102596345   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 nta-r.1   107832250   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 nta-r.1   107796900   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 osa-u.5   4336227   pentatricopeptide repeat-containing protein At4g38010 
 hvu-r.1   123427073   pentatricopeptide repeat-containing protein At4g38010-like 

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Top 50 coexpressed genes to AT4G38010 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G38010 (ath-m.4.tis coexpression data)

CoexMap"829957"


athAT4G38010 | Entrez gene ID : 829957      
Species ath bna vvi ppo mtr sot nta osa hvu cre bra tae bdi gma zma cit sly ghi sbi
Paralog 9 3 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_195514.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  mito 1,  vacu 1  (predict for NP_195514.1)
Subcellular
localization
TargetP
other 4  (predict for NP_195514.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT4G38010
ath-u.5
for
AT4G38010
ath-r.7
for
AT4G38010
ath-m.9
for
AT4G38010
ath-e.2
for
AT4G38010
ath-m.4.bio
for
AT4G38010
ath-m.4.hor
for
AT4G38010
ath-m.4.lig
for
AT4G38010
ath-m.4.str
for
AT4G38010
bna-r.1
for
125596730
bna-r.1
for
106393211
bna-r.1
for
106388894
vvi-u.5
for
100243207
vvi-u.5
for
100265770
ppo-u.5
for
7484408
mtr-u.5
for
11424766
sot-r.1
for
102596345
nta-r.1
for
107832250
nta-r.1
for
107796900
osa-u.5
for
4336227
hvu-r.1
for
123427073


Ortholog ID: 12223
Species ath bna bna bna vvi vvi ppo mtr sot nta nta osa hvu
Symbol AT4G38010 LOC125596730 LOC106393211 LOC106388894 LOC100243207 LOC100265770 LOC7484408 LOC11424766 LOC102596345 LOC107832250 LOC107796900 LOC4336227 LOC123427073
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829957 125596730 106393211 106388894 100243207 100265770 7484408 11424766 102596345 107832250 107796900 4336227 123427073
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